KEGG   Leishmania donovani: LDBPK_303490
Entry
LDBPK_303490      CDS       T02289                                 
Name
(RefSeq) DNA ligase I, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ldo  Leishmania donovani
Pathway
ldo03030  DNA replication
ldo03410  Base excision repair
ldo03420  Nucleotide excision repair
ldo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ldo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LDBPK_303490
   03410 Base excision repair
    LDBPK_303490
   03420 Nucleotide excision repair
    LDBPK_303490
   03430 Mismatch repair
    LDBPK_303490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ldo03032]
    LDBPK_303490
   03400 DNA repair and recombination proteins [BR:ldo03400]
    LDBPK_303490
Enzymes [BR:ldo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LDBPK_303490
    6.5.1.6  DNA ligase (ATP or NAD+)
     LDBPK_303490
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LDBPK_303490
DNA replication proteins [BR:ldo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LDBPK_303490
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LDBPK_303490
DNA repair and recombination proteins [BR:ldo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LDBPK_303490
   NER (nucleotide excision repair)
    Other NER factors
     LDBPK_303490
   MMR (mismatch excision repair)
    Other MMR factors
     LDBPK_303490
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 13385769
NCBI-ProteinID: XP_003863060
UniProt: E9BM92
LinkDB
Position
30:1286642..1288645
AA seq 667 aa
MAKLFQESSFDPVTTFEAVWLPPRVPVAPPTAGASEPVPFAAVVDVLADISATGSRLECL
KQLTFLLLAVIERCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCSMTEARA
KEAYRQSGDLAEIAQMHKQKQSTLMKPKPLSARSVFKTYKEIAMMSGRDVMRRRSDLIKG
LLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFLGGAQMHKMDEVQLQTLL
NTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPGSSIAKRYAKDLSIRPGLPVKPQLAY
PTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKDKGFHIFSRNSETHTGKYPDVISMLP
KVFDPVEVQSFILDSEVVAVHPETGALQAFQVLQHRGRKNIAEEDVSIPVCVFVFDILYF
NGEPQLNKTLQQRRELLWRCIHPLPAKLSFATYLDSDKVEDIQTFLERSIADGCEGLMVK
TLDEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLVPIAAFHGKGKRTGVFGGFLLACYDP
KADEYQSICKIGTGFQDEELEKLTQSLKPFVVDDKPRYYRAGGEEPDVWLTEAQVWEVKA
ADLSVSPVHQAAVGLVDPSKGIALRFPRYLRQREDKKPADATNAQQVADMYKAQSLAVQH
EANGDAE
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggcgaagctcttccaggagtcctccttcgatcctgtgacgacgttcgaggcagtatgg
ttgcctccccgggtccctgtcgcgccgcctaccgctggcgcatctgagccggtgccgttt
gcggcagtagtggacgtgctggcagacatcagcgccaccggctcgcggcttgagtgcttg
aagcagctcacctttcttctgcttgctgttatcgagcggtgcccagaggacttggtgccg
gtgatgtacctggtgattaacaagcatgcgccgcagcacgagggcgtggagctaggcatc
ggcgatgcggtactggtgaaggcggtggccgagtgctgcagcatgacggaggcccgagcc
aaagaggcgtaccggcagagcggcgatttggcggaaatcgcgcagatgcacaagcagaag
caaagcacgctcatgaagccgaagccgctctccgctcggagcgtgttcaagacatacaag
gagatcgcgatgatgagcggcagggatgtgatgcggcggcggtcagacttgatcaaggga
cttttgcgcgacgcacagggcccggaggtgaacttgattgtgcgtgggcttcagcagaag
atgcgcatcggccttgctgagccatccgccttggcagctgtggggtacgccttcgctctt
cacttcctcggaggcgcgcaaatgcacaagatggacgaggtgcagctgcagacgttgctg
aataccggcgccgacagtctcgcgcgtatcttctacgaggtgccgagtctcgacgtggtc
ctgagcgccgttcttgcgaacggcttcatgaccttggtgccgggtagctccatcgcgaaa
cggtatgcgaaggacttgtctattcggcctgggctgccagtgaagccccagctagcgtac
ccgacgagcagtatcaccgtcattctggaccgtctgcagggcaagaagttcacgtcggag
tacaagtacgacggcgagcgcgcgcagatccactatgacaaagacaaaggcttccatata
ttttctcgcaactccgagacccacaccggcaaatacccggacgtcatttccatgctgcca
aaggtctttgacccagtcgaagtacagtctttcatcctcgattcggaggttgtggcggtg
catccggagaccggggcccttcaggcattccaagtgctgcagcatcgcggccgaaagaac
attgcagaggaggatgtcagcattcccgtctgcgtgtttgtgtttgatatcttgtatttc
aacggagagccgcaactgaataagacactgcagcagcgtcgcgagctgctgtggcggtgc
atccatccccttccggcaaagctgtcctttgccacttacttggattccgacaaggtcgag
gacattcaaacgtttttggagcggtccatcgcggacggctgcgaaggattaatggtgaag
acgctcgatgaggaggccaactacacccccgccaagcgctcgcactactggctgaagctg
aagaaggactacatggacggcgtcaccgatacgctggatcttgtccccatcgccgcgttc
cacggcaagggcaagcgaactggcgtgttcggcggcttcctgctggcgtgctacgacccg
aaggcggacgagtaccagagcatctgcaaaatcggcaccggcttccaggacgaagagctg
gagaagctcacgcagtcccttaagccgttcgtggtggacgacaagccgcgctactaccgc
gcaggtggggaggagccggatgtttggctcaccgaggcgcaggtgtgggaggtgaaggcg
gcggacctgtcagtgtcgccagttcatcaggcagccgtggggcttgtggaccccagcaaa
ggcatcgcgctgcgctttcctcgctacctgcgccagcgcgaggacaagaaacccgcagac
gccacaaatgcacagcaggtggcggacatgtacaaggcgcagtccttggcagtgcagcac
gaagcgaacggggacgccgagtga

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