Leclercia sp. W17: DVA44_22680
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Entry
DVA44_22680 CDS
T05987
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lee
Leclercia sp. W17
Pathway
lee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVA44_22680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lee03019
]
DVA44_22680
03400 DNA repair and recombination proteins [BR:
lee03400
]
DVA44_22680
Enzymes [BR:
lee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DVA44_22680
Messenger RNA biogenesis [BR:
lee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DVA44_22680
DNA repair and recombination proteins [BR:
lee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVA44_22680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AXF66699
UniProt:
A0A345CFZ4
LinkDB
All DBs
Position
complement(4583118..4584947)
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AA seq
609 aa
AA seq
DB search
MVQAEVVNQESLAKQVLHETFGYHQFRPGQETIINTALEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQVRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPSVPFMAL
TATADDTTRQDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQESCGNCDICLDPPKQYDGLMDARKAL
STIGRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGRDQSHEHWVSVIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGEVELQLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHTDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcaggcggaagtcgttaatcaggagtcgctggctaaacaggttttgcatgaaacc
tttggctatcaccagttccgcccgggccaggaaaccatcataaacacggcccttgagggg
cgtgactgtctggtggtcatgccgacaggcggcggtaaatcgctgtgctatcaggttccc
gcgctggtactgaatggtctgacggtggtggtgtcaccgctgatctcgctgatgaaagac
caggtcgaccagctgctggcgaacggcgtggcggcggcctgcctcaactctacccagacc
cgcgagcagcagcaggaggtgatggccgggtgccgcaccgggcaggttcgtctgctctat
atcgctccggagcgcctgatgctggataacttccttgagcatctggcgcactggaatccg
gtactgctggcggtagatgaagcgcactgtatctcccagtgggggcatgatttccgcccg
gagtatgccgccctcggtcagctgcgtcagcgcttcccgtcggtgccgtttatggccctt
accgctaccgccgacgacaccacccggcaggacatcgtgcgtctgctggggctcaacgat
ccgctgattcaggtcagcagcttcgaccgcccgaacatccgctatatgctgatggagaaa
tttaagccgctggatcagctgctgcgctatgtgcaggagcagcgcggcaaatccggcatt
atctactgcaacagccgggcgaaggttgaagacaccgccgcccgtctgcaaagccgtggc
ttcagcgccgcggcctatcatgcggggctggaaaaccacatccgtgccgacgtgcaggag
aaattccagcgcgacgacctgcaaattgtggtggcgactgtcgccttcgggatgggtatc
aacaagccgaacgtgcgctttgtggtgcatttcgacattccgcgcaatatcgaatcctac
tatcaggagacgggccgcgccgggcgtgatggcctgcccgccgaggcgatgctgttttac
gatccggcggatatggcctggctgcgtcgctgcctggaagagaaaccccaggggcagttg
caggatatcgagcgtcacaagctcaacgcgatgggcgcctttgccgaagcgcaaacctgc
cgccgtctggtgctgctgaactattttggcgaggggcgccaggagtcgtgcggcaactgc
gatatctgcctcgacccgccgaagcagtacgacgggctgatggacgcgcgtaaggcgctc
tccaccattggccgcgtcaatcagcgcttcgggatgggctacgtggtggaagtgctgcgc
ggtgctaacaatcagcgtatccgcgagatggggcatgacaagctgccggtgtatggcatt
ggccgcgatcagagccatgagcactgggtcagcgttatccgtcagctgatccacctgggc
tttgcgacccagaacattgcccagcattccgcgctgcagctgaccgaagccgcccgtccg
gtgctgcgcggcgaagtcgaattgcagcttgccgtgccgcgcgtggtggcgctgaaaccg
cgtgtgatgcagaaatcctacggcggcaactatgaccgcaagctgttcgccaagctgcgt
aagctgcgcaaagccattgcggatgaagagaatatcccgccttatgtagtgttcaacgat
gcgacgctgattgagatggccgagcagatgccgctcagcgccagcgaaatgctcagcgtc
aatggcgtgggcacccgcaaactggagcgcttcggcaaagagtttatggcgcttattcgt
tctcataccgatggtgatgatgaggagtag
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