Leclercia sp. LSNIH1: C2U54_00055
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Entry
C2U54_00055 CDS
T05297
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei00040
Pentose and glucuronate interconversions
lei01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C2U54_00055
Enzymes [BR:
lei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
C2U54_00055
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AUU82521
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Position
10493..11620
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AA seq
375 aa
AA seq
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MKGKIIPLRFRPRQDSETGHEVIRLTPPHIICHRNYFYQKCFTRDGSKLIFGGAFEGHWN
YYLLDIAQQQAIQLTEGPGDNTFGGFLSTDDRSLWYVKNSRELRRVDLGSLEEYVVYEVD
DDWVAYGTWVANSDCTKLVGIEIKKSDWQPLTDWSKFRAFYFTHPECRLINIDLQTGERR
VILQEKRWLGHPIYRPFDDNTVAFCHEGPRDAIDARMWLINEDGSNLRKVRQHAEGESFT
HEFWVPDGSALYYVAHKENDPQRYLFSADPATLENRQLMAIPPCSHLMSNHDGSLIVGDG
APHNTGNISLNDPFIWVFDIAKGTQTAVCQHNTSWKVLDGDRQVTHPHPSFSPDNQWVLY
TSDEEGMPALYLARV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaaaaatcattcccctgcgttttcgacctcgtcaggacagtgaaaccggacac
gaggtgatccgcctgacgcccccgcacatcatctgtcaccgtaactacttctatcaaaaa
tgttttacccgtgatggcagcaagctcatctttggcggcgcctttgagggccactggaac
tactatctgctggacattgcgcagcagcaggcgatccagcttaccgagggccccggagat
aacacctttggcggcttcctctccacggacgatcgctcgctgtggtatgtgaaaaacagc
cgcgaactgcggcgcgtcgacctcgggagtctggaggagtatgtggtctatgaggtcgat
gacgactgggtggcctacggtacctgggtggcgaactcggactgcacgaagctggtaggt
atcgagattaaaaaaagcgactggcagccgctcaccgactggagcaaattccgcgcgttt
tactttacccacccggaatgccgcctgatcaatatcgacctgcaaaccggcgaacgccgc
gtgattttgcaggaaaagcgctggctcggacacccgatctaccgtccttttgacgataat
accgtggcgttttgtcacgaagggccacgggatgcgatcgacgcccgcatgtggctgatt
aacgaggatggcagcaatctgcgcaaggtgcgccagcatgctgagggggagagttttacc
cacgagttctgggtgcctgacggctccgcgctctattacgtggcgcacaaggagaacgat
cctcagcgctatctgttcagcgccgatcccgccaccctggaaaatcgccagctgatggcg
atcccgccctgctcccatctgatgagtaaccacgacgggtcgctgatcgtcggcgacggc
gcgccacataataccggcaatatcagcctgaacgacccctttatctgggtgttcgatatt
gccaaaggcacgcaaaccgccgtctgtcagcacaataccagctggaaagtgctcgacggc
gaccgccaggtgacccatccgcatccgtcgttttcaccggataatcagtgggtgctctat
acctccgacgaagaagggatgccggcgctgtacctcgcccgggtgtaa
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