Leifsonia sp. PS1209: HF024_08265
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Entry
HF024_08265 CDS
T06547
Name
(GenBank) cadherin-like domain-containing protein
Organism
leif
Leifsonia sp. PS1209
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Y_Y_Y
Pur_ac_phosph_N
Bact_surface_Ig-like
Motif
Other DBs
NCBI-ProteinID:
QIZ98504
UniProt:
A0A6H1W5W3
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All DBs
Position
1743418..1748634
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AA seq
1738 aa
AA seq
DB search
MVAGVPLTIAVLHNGFPVNAVDLDTRDVWVTNGDKLMGGRLNHQINELDAAVTGASSDLD
VLQDGSAYFLTDAPHGTVDKIDPAFVSLGGRIQIPEKSQLGYGGNTLSVLSPAGQLWVLD
ASGRLDFDKTKTRPTAKVGQDAQLVVTKSGTTFVVAPSGKKLYTVEHPGAEPTTASFPVP
GRFQLSAVGDRPVVLDTQGNRLVTADGKTVDLPAKGLKLQQPSADDPSALVATASSLLSV
PLGGGTVVAHPAGATAAGGTAAVSAPVRLGSCSYGAWAGSARYLYACDGKKDIGVDIDQP
VKGDDLEFRVNHGVIALNNLRDGNAWVVSSNMRLVQNWAQLKPNETTVQGDTGEEKPVLQ
SFSDTLAQRTKVNRPPTAVPDAFGVRPGRSTVLPVLANDTDPDGDVLTISDVSAIPAAQG
TLELVEGGRAIQFTPGDGLSGTISFRYTVDDGRGGTSSTQVDATLHQPAQNAAPASTRAS
TAQAEVGQSVKYDVLNDWLDPDGDDLSLVSAAATTEDDVQFKPNGEVTFTSKTGQTGSKE
VKVTVSDGKKSTTGSLLITVKPAGSLDPVAVPDFGGGFTGKPVVVHPLDNDQSPSGQPLS
LVGASIDGQAAADVTTDAARGTVTLLSNAPGEFYVTYTLGAGPKSTTGLIRVNVVADGGS
DAPPVAVTDTAYVRPGEPTSVSVLDNDVSPSGRVLVVRSVTAAKGAGDLNVEVLDNAIVK
ITAPTVLAEQVQLVYTVSDGIHEAKAGITVVPVPPLVTHQPPIAVDDTVTVRAGDIATVP
VMDNDYSPDNAPFSLDPALRDDAAAGKGATAFVSGKTVRYQAPTQPGQYSVVYGVTDKLG
QKAQATVSFVVTAPDKGSDKAPRPQPLTIRAFAGSTVPVDVPLDGIDPDGDSVTLAGLGT
QPTLGRISDSSSTSFTYEAYPDSAGTDTFTYQVKDTYGKTATGTVSIGVIPRPTSVQSPI
AGNDPVQVKPGRTVSVPVLDNDSDPNGYTIAVQKKLLQVDAGLKASVHGKVVLVTAPKTE
GAYIVRYQISNGQGGVASAFIQVTVTPNAKEQYPSAVDHLIEPDAVANKDSVKVDALAGA
TNPSGLVEDLTVAVTGPNAGAAEVGAGGAITVHPAAKRLAIAYQVKDPVTGLTGDAFIIV
PPKGDATAPPSIAKSLPQQIVEMGGSKTWKLSDILDVPSGRAVKLTGASGVSATNSTGAS
SYGDEQTLRFTAAKDYRGPAAITFKVNDGRDAGQTTDRITTLVLPITVGSPDQSDVAPTF
TSPSEKIEPGEAPLTIDLRASSFHPNPAILAKLTYSNPQWANKQIQVGLNGSSLSLSAPL
GVQPGQSTTVAVTISSGTHTIAGTVNVQVVSSNRPVASQKNPPQTQELQRGKSVTLSGAA
SDSAWVNPFPGHPLTITDAKAGSAPSGVTVTYTGSSITVSAASGAAIGAVNIVYHVQDAT
KDPKRTAAAVGQYRVTVHDVPDKPGAPSNAKASDGQATVDIAAPANNGKPIDQYEVRGGP
KAVTTSSIGQVTIGGLTNGTAYSFTVRAHNADGWSQQSAPSASVTPYGTPQAVSGATISA
DQYAPSDLRLSWNGLSDPSGTGGGSVTYQWRLNGGAWNNTSGTTATVSNQGVGDYSFQVR
AVNDHSNKTGGADTSNTVSVAKKPDPQPSIDLSQGDLEPGYAHSFTYDVTLNHFGANTRY
TMNFYCNGGKLTSESITTNGSGYAHYRGAPNGLHAYCGYKGAYVTAGGVQSSVQDWSP
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgcgggagtcccgctgaccattgccgtgctccacaacggcttcccggtgaacgcc
gtcgacctcgacacccgcgacgtctgggtgaccaacggcgacaagctgatgggcgggcgt
ctcaaccaccagatcaacgaactggatgcagcggtcaccggagcgagctccgacctcgac
gtcctccaggacggctccgcgtacttcctcaccgacgcaccgcacggcacggtcgacaag
atcgacccggcgttcgtctcgctcggcggccgcatccagatcccggagaagtcccagctc
ggctacggagggaacacgctctccgtgctctcgccggccgggcagctctgggtgctcgac
gcgagcggccgactcgacttcgataagacgaagaccaggccgacggccaaggtcggccag
gatgcgcagctcgtcgtgaccaagtcgggcaccaccttcgtggtggcgccgagcggcaag
aagctctacaccgtcgagcacccaggagcggagccgacgacggcgtcgttccctgttccc
ggacggttccagctctccgccgtcggtgaccggcccgtcgtgctcgacacgcagggcaac
cgcctcgtcacggcagacgggaagacggtcgacctgcccgccaagggcctgaagctgcag
cagccgagcgccgacgacccgtccgcgctggtcgcgacggcgtcgagcctgctcagcgtc
ccgctcggtgggggaaccgtcgtcgcgcatcccgccggtgcgacggcagccgggggaacg
gccgcggtctccgcgcccgtgcgcctcggcagctgctcgtacggcgcgtgggcgggctcc
gcccgctacctctacgcctgcgacggcaagaaggacatcggcgtcgacatcgaccagccg
gtgaagggtgacgacctcgagttccgggtcaaccatggcgtgatcgccctcaacaacctc
cgggacggcaacgcctgggtggtctcctccaacatgcgcctcgtgcagaactgggcgcag
ctgaaaccgaacgagaccaccgtgcagggcgacaccggcgaggagaagccggtgctgcag
tcgttctccgacaccctcgcgcagcgcacgaaggtgaacaggccgccgaccgccgttccg
gatgcgttcggcgtgcgccccggccgctcaaccgtgcttcccgtgctcgccaacgacacg
gacccggacggcgacgtgctcacgatctcggacgtgtccgccatcccggccgcgcagggc
accctcgaactggtcgagggcgggcgcgccatccagttcacccccggcgacggactgagc
ggcaccatctcgttccggtacacggtcgacgacgggcgaggcggcacctcctcgacgcag
gtggatgcgaccctgcaccagccggcgcagaacgccgcccccgcctccacgagggcgagc
acggcgcaggccgaggtcggccagtccgtgaagtacgacgtcctcaacgactggctcgac
ccggacggcgacgacctctcgctcgtgtccgcggcggccaccaccgaggacgatgtccag
ttcaagccgaacggcgaggtgaccttcaccagcaagaccgggcagaccggctcgaaggag
gtcaaggtcaccgtctcggacggcaagaagagcacgacgggtagcctgctcatcacggtc
aagcccgccggatcgctcgaccccgtcgccgtgcccgacttcggcggcgggttcaccggg
aagccggtggtcgtgcatccactggacaacgaccagtcgccgtccgggcagccgctcagc
ctggtgggcgcctcgatcgacggtcaggcggccgccgacgtgaccacggacgccgcgcgc
ggcaccgtcaccctgctcagcaacgcgcccggcgagttctacgtgacgtacaccctgggg
gccgggccgaagtcgaccaccgggctgatccgggtcaacgtggtcgccgacggcggctcg
gacgccccgcccgtcgccgtcacggacaccgcatacgtgcgcccgggcgagccgacctcg
gtcagcgtgctcgacaacgacgtgtccccgtccgggcgggtgctcgtcgtccggtcggtc
accgcggccaagggagcaggcgatctcaacgtcgaggtgctcgacaacgcgatcgtcaag
atcacggcgccgaccgtgctcgccgagcaggtgcagctggtctacaccgtctcggacggc
atccacgaggcgaaggcgggcatcaccgtcgtcccggttcctccgctggtcacccaccag
ccgccgatcgccgtcgacgacacggtgacggtgcgcgccggcgacatcgcgactgttccg
gtgatggacaacgactactcgccggacaacgctccgttctcgctcgaccccgctctccgc
gatgacgcggcggcgggcaagggtgccaccgcgttcgtcagcggcaagaccgtgcgatac
caggcgccgacccagcccggccagtacagcgtcgtctacggcgtgacggacaagctcggc
cagaaggcccaggccacggtgagcttcgtggtcacggctccggacaagggctccgacaag
gcgccgcgcccgcagccgctcacgatcagggcgttcgccggatcgaccgtgccggtggac
gtgccgctcgacggcatcgacccggacggcgactcggtcacgctcgccgggctcggaacg
cagccgaccctcggccgcatctccgacagctcgagcacgtccttcacctacgaggcgtac
ccggactcggcgggcacggacacgttcacctaccaggtcaaggacacctacgggaagacg
gcgaccggcacggtcagcatcggcgtcatcccgcggccgacctccgtgcagtcgccgatc
gccgggaacgacccggtgcaggtgaagccgggacgcaccgtctccgtcccggtgctcgac
aacgactccgaccccaacggatacaccatcgccgtgcagaagaagctgctgcaggtggat
gcgggcctcaaggcctccgtgcacggcaaggtggtcctcgtcaccgccccgaagaccgag
ggcgcgtacatcgtccgctaccagatcagcaacggccagggcggtgtcgcgagcgccttc
atccaggtgaccgtcaccccgaacgccaaggagcagtacccgtcggcggtcgaccacctg
atcgaaccggatgctgtcgccaacaaggacagcgtgaaggtggatgcgctggccggggcg
accaacccgtccggcctcgtcgaagacctcacggtcgcggtcaccggcccgaacgcggga
gcggccgaggtgggtgccggcggcgcgatcaccgtgcatcccgcggccaagcggctcgcc
atcgcctaccaggtgaaggatccggtgaccggcctcaccggcgacgcgtttatcatcgtg
ccgccgaagggcgacgccacggcccctccgagcatcgcgaagtcgctgccgcagcagatc
gtcgagatgggcgggagcaagacctggaagctgtcggacatcctggatgtgccgtccggc
agggcggtcaagctcaccggagcgagcggggtcagcgcgaccaacagcacgggcgcctcg
tcgtacggcgacgagcagacgctccgcttcaccgcggcgaaggactaccggggtccggcg
gcgatcacgttcaaggtcaacgacggacgggatgctggccagacgaccgaccgcatcacg
acgctggtgctgccgatcaccgtcggcagtcccgaccagtcggatgtcgcgccgaccttc
acgtcgccgagcgagaagatcgaaccgggggaggctccgctgacgatcgacctccgcgcg
tcgagcttccacccgaacccggcgatcctggcgaagctcacgtactcgaacccgcagtgg
gcgaacaagcagatccaggtggggctgaacggctcgtcgctgtccctgtccgcgcccctc
ggcgtgcagcccgggcagtcgacgacggtcgcagtgacgatcagttcggggacgcacacg
atcgcgggcaccgtcaacgtgcaggtggtgagctccaaccggccggtcgccagccagaag
aacccgccgcagactcaagagctgcagcgcgggaagtcggtgaccttgagcggcgccgcg
agcgactcggcctgggtgaacccgttccccgggcatccgctcaccatcaccgatgccaag
gccggcagcgctccgtccggggtgacggtgacgtacaccgggtcgtcgatcacggtgagc
gcggcctccggtgcggcgatcggcgccgtcaacatcgtctaccacgtgcaggatgcgacg
aaggacccgaagcgcacggccgcggccgtcgggcagtaccgcgtgaccgtccacgacgtt
ccggacaagccgggtgcccccagcaacgccaaggcgagcgacgggcaggcgacggtcgac
atcgccgccccagcgaacaacgggaagccgatcgaccagtacgaggtgcgcggcggcccg
aaggccgtgaccacgagctcgatcggccaggtgaccatcggcgggctgaccaacggcacg
gcgtactcgttcaccgtgagggcgcacaacgcggacgggtggagccagcagtcggcgccg
agcgcgtccgtcacgccgtacgggaccccgcaggcggtcagcggcgcgacgatcagcgcc
gaccagtatgcgccgagcgacctgcggctgagctggaacggtctgtccgacccctccggc
acgggcggcggttcggtgacgtaccagtggcggctcaacggcggagcgtggaacaacacc
tcgggaacgaccgcgacggtgtcgaaccagggcgtcggcgactactcgttccaggtgcgc
gccgtcaacgaccacagcaacaagaccggtggcgctgacacctccaacacggtctccgtg
gcgaagaagccggacccccagccgtcgatcgacctctcccagggcgacctggaacccgga
tatgcgcacagcttcacctacgacgtgacgctcaaccacttcggcgcgaacacgcggtac
acgatgaacttctactgcaacggcggaaagctcaccagtgagtcgatcaccaccaacggc
agtggatacgcgcactaccgaggtgcgccgaacgggctgcacgcgtactgcggatacaag
ggtgcgtacgtgacggcaggcggcgtgcagagcagcgttcaggactggtccccgtaa
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