Leifsonia sp. PS1209: HF024_11835 Help Entry HF024_11835       CDS       T06547                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism leif  Leifsonia sp. PS1209 Pathway leif03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:leif00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     HF024_11835  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:leif03400]     HF024_11835 Enzymes [BR:leif01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      HF024_11835 DNA repair and recombination proteins [BR:leif03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      HF024_11835 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S Motif Other DBs NCBI-ProteinID:  QIZ99133 UniProt:  A0A6H1W714 LinkDB All DBs Position 2479273..2481735 Genome browser AA seq 820 aa AA seqDB search MAATDTESVEIDGHRLKLTNLDKVLYPETGTTKADVIGYYNAIAEVMLPHIRDRVVTRKR WVHGVGTPDEPGEVFFQKNLDASSTPSWVKRRTITHKSHSNDYPLVNDRATLIWLAQIAS LEIHVPQWRVSRNGTPKNPDRLVLDLDPGEGVTLADCAEIAVLARGILTDMGLDPMPVTS GSKGIHLYAALDGSQTSEQVSAVAHELARVLEADHPDLVVSDMKKALRVGKVLVDWSQNN AAKTTIAPYSLRGRFRPTVAAPRTWRELARKDLAQLDFTEALARVKRRGDPLADLSAGHL DEEVHGAAEDRLTTYRSKRDAAKTPEPVPEKLQHSTSGRTFVIQEHHARRLHWDFRLEHD GVLVSWALPKGPPTDPGQNHLAVHVEDHPLEYGAFEGDIPHGEYGAGHVTIWDAGDYDLE KWRDDEVIVTLHGTKGGGLGGDRKFALIHTGGAGKAEQNWLIHLMKDDAAKGQGTKPAKA AKADAPTRTTPNRTTPARLSAKPISPMLATLGSEKDVHDESEWAFEMKWDGIRAIAEVRG DALRLSTRNGNDVTVAYPELRTLTEVADGHELVLDGEIVALDKTGRPDFGLLQTRMGLTR PSDVDAAVSRAPVHYMVFDLLELDGENCRGKTYDERRAALEDVLRPPKGDPVQVPPAFDG DLRHAVDASRELDLEGVMAKQRDATYATGRRSRTWIKIKHHRTEEVVIAGWKPGNGRRAN TVGSLLLGIPDGDGLRYVGKVGTGFTDAMLDDLAKRLAAHPRKTSPLTDVPSADARDAHW VRPELVGEVEFAEWTPTARLRQPSWRGLRPDKSVEDINVE NT seq 2463 nt NT seq  +upstreamnt  +downstreamnt atggccgccactgacaccgagtccgtcgagatcgatgggcatcggctgaagctgaccaat ctggacaaggtgctgtacccggagaccggtaccaccaaggccgatgtgatcgggtattac aacgccatcgccgaggtcatgctgccgcacatccgggatcgggtggtcacccgcaagcgg tgggtgcacggggtggggacgccggatgaacccggcgaggtgttcttccagaagaacctg gatgcgtcgtcgacgccgtcgtgggtcaaacggaggacgatcacgcacaagagccactcc aacgactatccgctggtcaacgacagagcgacgctgatctggctggcgcagatcgcatcg ctggagatccacgtgccgcagtggcgggtgtccaggaacggcacgccgaagaatccggac aggctggtgctcgacctggatcccggcgagggggtcacgctcgccgactgtgccgagatc gccgtgctcgcccgcggcatcctcaccgacatggggctcgacccgatgccggtgaccagc gggtccaaaggcatccacctgtatgcggcgctcgacggcagccagaccagcgagcaggtc tccgccgtcgcccacgaactcgcccgggtgctcgaagccgaccatcccgacctcgtcgtg agcgacatgaagaaggcgctgcgggtcggcaaggtgctcgtggactggagccagaacaac gcggccaagaccacgatcgcgccgtattcgctgcgcgggcggttccgcccgaccgtcgcg gcgccccgcacctggcgggagctcgcgcggaaggacctcgcccagctcgacttcacggag gcgctcgcccgcgtgaagcggaggggcgacccgctcgccgatctgtccgccgggcacctc gacgaggaggtgcacggcgcggcggaggacaggctgacgacctaccgcagcaagcgcgac gccgccaagacgccggaacctgttccggagaagctgcagcactcgaccagcgggcgcacg ttcgtgatccaggagcaccacgcccgtcgcctgcactgggacttccgcctggagcacgac ggcgtgctggtcagctgggcgcttcccaagggcccgccgaccgatcccggacagaaccat ctcgccgtgcacgtggaggaccacccgctcgaatacggtgcgttcgagggcgatatcccg cacggcgagtacggcgcagggcatgtgacgatctgggatgcgggcgactacgacctcgag aagtggcgcgacgacgaggtgatcgtgaccctgcacggcacgaagggcggcgggctcggc ggcgacaggaagttcgcactcatccacaccggcggggcgggcaaggcggagcagaactgg ctcatccacctgatgaaagacgatgcggcgaaaggccagggcaccaagcccgcgaaggcc gccaaggccgacgcgcccacccgcaccacacctaaccgcaccacacccgccaggctctcc gccaagcccatctcccccatgctcgccactctcggctccgagaaggacgtgcacgacgag tccgagtgggcgttcgagatgaagtgggacggcatccgcgccatcgcggaggtgcgcggc gatgcgctccggctgagcacccgcaacggcaacgacgtcaccgtcgcatatccggagctg cgcacgctcaccgaggtcgccgacgggcacgagctggtgctcgacggcgagatcgtcgcc ctcgacaagaccggccgccccgacttcggcctgctgcagaccaggatgggcctcaccagg ccgtccgacgtggatgcggctgtcagcagggcgcccgtgcattacatggtcttcgacctc ctcgaactcgacggcgagaactgccgcggcaagacctacgacgagcgtcgcgctgccctc gaagacgtcctccgcccgccgaagggcgaccccgtgcaggtgccgcccgcgttcgacggc gacctccggcacgccgtggatgcgagcagggagctcgacctcgaaggcgtcatggccaag cagcgcgacgcaacatacgccaccggccgccgctcccgcacctggatcaagatcaagcac caccgcacggaggaggtcgtgatcgccgggtggaagccgggcaacggccggagggcgaac accgtcgggtcgctgctgctcggcatcccggacggcgacgggttgcgctacgtcggcaag gtcggcaccgggttcaccgacgcgatgctggacgacctcgcgaaacgcctggcagcgcat ccacggaagaccagcccgctcaccgatgtgccgtccgccgacgcccgggatgcgcactgg gtgcggcccgaactcgtcggcgaggtggagttcgccgagtggacgccgacggccaggctg cgtcagccgtcgtggcgcgggctgcggccggacaagtccgtcgaagacatcaacgtggag tga

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