Lodderomyces elongisporus: PVL30_001097
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Entry
PVL30_001097 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lel
Lodderomyces elongisporus
Pathway
lel03022
Basal transcription factors
lel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVL30_001097
09124 Replication and repair
03420 Nucleotide excision repair
PVL30_001097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_001097
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_001097
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PVL30_001097
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PVL30_001097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
zinc_ribbon_11
zinc_ribbon_15
zf-HIT
Motif
Other DBs
NCBI-GeneID:
5234754
NCBI-ProteinID:
XP_001528612
UniProt:
A5DUU6
LinkDB
All DBs
Position
1:3052461..3053990
Genome browser
AA seq
509 aa
AA seq
DB search
MNDSDDEYVSGTGGETKSPSSRLSSTTPGSASGLKDGISARTRSRGGEISDLKKANGYAW
EDEYQRSWDIVKDDEWGNGSFEAMVQSIIENRKKKIMKNPSVPYQRGIIRTLVIAIDGSQ
AMAEKDLRPTRLSMTLNYLQEFVVEFFDQNPISQIGIVLMRNGVANLVSEVSGSPQYHID
KLRQLKARQHNKFEPKGDPSLQNTLEMARSLLKFNFGTSSNNTKNSKEILVVLGSLFTSD
PGNIHKTIEGLVKDEIKVRVIGLSAQVAICQELVNRTNHEPKNTMSKNYGVIMNEYHFKE
LLMDCVTPLPLTEEFRKPTESTNQGGTAGVPVIKMGFPSKAQPNVTSAIGNTEFTVEFPN
LNASYPTQGSAESKDVIEVSNNSLRQSASLIIGYRCPQCKSKVCNLPTICPVCGLMLILS
THLARSYHHLVPLAPYVEVEVKSAYDSEECYGCQLRFPKGVDLKVEKKSLDSMISSRYKC
PKCKKDFCINCDVFVHEVLHNCPGCENGI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattcagatgatgaatatgtgtccggtactggtggtgagactaaatcgccatct
tcgcgtttatcatcaactactccgggttctgcgtcaggccttaaagatggtatctctgca
agaacaaggtccagaggaggcgaaatcagtgatttgaagaaagcaaacgggtatgcatgg
gaagacgagtaccaaagatcatgggatattgtcaaagacgatgaatggggaaatggatca
tttgaagcaatggtgcagtccattattgaaaacagaaaaaagaaaatcatgaaaaatcct
agtgttccatatcaaagaggaatcattagaacattggttatagctattgacggctcccag
gctatggctgagaaagatcttagaccaactagactctcaatgactcttaactatttacaa
gagtttgtggtggagttttttgatcaaaatccaatatcccaaattggaattgtactaatg
agaaatggtgttgcaaatttagttagtgaagtaagtggactgccgcaataccatatagac
aagcttaggcaattgaaagcacgacagcataataagtttgagccaaagggagacccttct
ttgcagaatactttggaaatggcacgctcgttgctaaaatttaactttggaacatcgtca
aataatacgaaaaactccaaagaaatacttgttgtgttaggctctttgttcactagtgac
ccgggaaacattcataagaccatagaagggctcgtcaaagacgaaatcaaagtaagagtc
attgggctctcagcacaagttgctatttgccaagaactagtcaatagaacaaatcacgag
ccaaagaatacaatgtcgaagaattacggtgtcatcatgaatgaatatcatttcaaagaa
ctacttatggattgtgtcacgccgctaccattgacagaagagttccgtaaaccaacagag
tcaacaaaccaaggaggcactgctggggttccagtaattaaaatggggttcccttcgaaa
gctcagcctaatgtaacgtcggctataggcaatactgagtttacagtggagttccccaat
ctcaatgcttcctatccgacgcagggctctgcggagtctaaagacgttattgaagtgagt
aacaacagtttgcgacaatcagctagcttgataattggttatcgttgtccacaatgcaag
agcaaggtttgcaatttacctacaatctgtcccgtttgtggtttgatgcttattttatca
acacatttggcacgatcgtaccaccacttggttcccttggctccttatgtagaggtggaa
gttaaaagtgcttacgacagtgaagagtgttatggttgtcagctccggttccccaaaggt
gtagaccttaaagtagaaaagaagagtttggattcaatgataagctcgcggtataaatgt
ccaaaatgcaaaaaagatttttgcataaactgtgatgttttcgtccatgaagtattacac
aactgtcctggttgtgaaaatgggatttaa
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