KEGG   Lodderomyces elongisporus: PVL30_002232
Entry
PVL30_002232      CDS       T01116                                 
Name
(RefSeq) uncharacterized protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
lel  Lodderomyces elongisporus
Pathway
lel03013  Nucleocytoplasmic transport
lel03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lel00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PVL30_002232
   03015 mRNA surveillance pathway
    PVL30_002232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lel03019]
    PVL30_002232
Messenger RNA biogenesis [BR:lel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     PVL30_002232
   mRNA cycle factors
    P-body specific factors
     PVL30_002232
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 5233737
NCBI-ProteinID: XP_001527377
UniProt: A5DXW9
LinkDB
Position
2:2521782..2523038
AA seq 418 aa
MASIAPSRNVGPKPMHRGPSSKKTQSINAKKSGPKVDNPELGIISGNFKLVVRLLPPALS
ESDFLTQLEGLYPQKENKIVRHYYVKGSYPQKPFELPVYSRAYVSFKNVADMNEFTGLVR
DKSFHDEKDSTIPIIEKSLFQKMIDGRQINTSGAIVNKRNKGRDKRKAVPLEDDDIYQRF
LQFLNHEIPEFDLIKVKEPAGKKRNKSKATTKVAATATDSPSSSSSSSLDALSKKTRGKK
KKTSKIVKKGGVPDSGQSKGNKNVNTKDNVEQQKVKDQKVGKNKNRKKSKTTAKDGVENK
KPASSQTAGEKQTESDSLAKQSKNKRRKKKKETQAKSENNETKEKEQKSTESSGTLEPNR
SRRRRSRKDRVETKQQQQQQQQSNSHSDDPRPLRRAENAPKKPIKILSSKAEKQSEDI
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggcatcgatagctccgagcagaaatgtgggtccgaaacctatgcaccgtggtccttca
tcgaagaaaactcaactgattaatgcaaaaaagtctggaccaaaagtggacaatccagaa
ctaggtatcatttccgggaactttaaacttgtggtgcgattgctcccgcctgcgctatct
gagtccgattttctcactcagttggaaggactttatccccaaaaagaaaacaaaattgta
cgacattactatgtcaaaggttcatatccccagaaaccttttgagttgcccgtatacagc
cgtgcttatgttagtttcaaaaatgttgccgacatgaatgaattcactggccttgttaga
gacaaatcatttcatgacgaaaaggactcgaccattccaattatcgaaaagtctttattt
caaaagatgattgatggcagacaaataaatactagtggtgcaatagtcaataagagaaat
aaaggaagggacaaaaggaaagcagtcccattggaagacgacgatatataccaaaggttt
ttgcaatttttgaaccatgaaattcctgaattcgatcttattaaagtcaaggaaccggct
gggaagaaaagaaacaagctgaaagccactactaaagttgctgctactgctactgattcc
ccttcttcctcttcttcttcttctttggatgctttgtcaaaaaaaaccagaggcaaaaag
aaaaagacatctaagattgtaaaaaaaggaggtgtacccgattctggtcaatcaaaaggc
aataaaaacgtcaatacgaaagataatgtagagcagcagaaagttaaagatcagaaagtt
ggcaagaacaagaacagaaagaaaagcaagactacagcaaaagatggcgtcgaaaataaa
aaacctgctctgctgcaaacggcaggtgaaaaacaaacagaatctgatagccttgcgaag
caactgaagaacaagagaagaaaaaagaagaaggaaacacaggctaagagcgagaacaac
gaaacaaaagaaaaagaacaaaaaagtacggaatctagtggtacactagagcctaatcgg
ctgaggagacgacgttctagaaaagatcgagtagagactaaacaacaacaacaacaacaa
caacagagtaattcgcatagtgatgatccgcgaccattacgaagagcagaaaatgcaccc
aagaaaccaataaagattcttagctcaaaagctgaaaagcaatcagaagatatttga

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