Lodderomyces elongisporus: PVL30_002232
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Entry
PVL30_002232 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K14328
regulator of nonsense transcripts 3
Organism
lel
Lodderomyces elongisporus
Pathway
lel03013
Nucleocytoplasmic transport
lel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVL30_002232
03015 mRNA surveillance pathway
PVL30_002232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_002232
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PVL30_002232
mRNA cycle factors
P-body specific factors
PVL30_002232
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
5233737
NCBI-ProteinID:
XP_001527377
UniProt:
A5DXW9
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All DBs
Position
2:2521782..2523038
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AA seq
418 aa
AA seq
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MASIAPSRNVGPKPMHRGPSSKKTQSINAKKSGPKVDNPELGIISGNFKLVVRLLPPALS
ESDFLTQLEGLYPQKENKIVRHYYVKGSYPQKPFELPVYSRAYVSFKNVADMNEFTGLVR
DKSFHDEKDSTIPIIEKSLFQKMIDGRQINTSGAIVNKRNKGRDKRKAVPLEDDDIYQRF
LQFLNHEIPEFDLIKVKEPAGKKRNKSKATTKVAATATDSPSSSSSSSLDALSKKTRGKK
KKTSKIVKKGGVPDSGQSKGNKNVNTKDNVEQQKVKDQKVGKNKNRKKSKTTAKDGVENK
KPASSQTAGEKQTESDSLAKQSKNKRRKKKKETQAKSENNETKEKEQKSTESSGTLEPNR
SRRRRSRKDRVETKQQQQQQQQSNSHSDDPRPLRRAENAPKKPIKILSSKAEKQSEDI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatagctccgagcagaaatgtgggtccgaaacctatgcaccgtggtccttca
tcgaagaaaactcaactgattaatgcaaaaaagtctggaccaaaagtggacaatccagaa
ctaggtatcatttccgggaactttaaacttgtggtgcgattgctcccgcctgcgctatct
gagtccgattttctcactcagttggaaggactttatccccaaaaagaaaacaaaattgta
cgacattactatgtcaaaggttcatatccccagaaaccttttgagttgcccgtatacagc
cgtgcttatgttagtttcaaaaatgttgccgacatgaatgaattcactggccttgttaga
gacaaatcatttcatgacgaaaaggactcgaccattccaattatcgaaaagtctttattt
caaaagatgattgatggcagacaaataaatactagtggtgcaatagtcaataagagaaat
aaaggaagggacaaaaggaaagcagtcccattggaagacgacgatatataccaaaggttt
ttgcaatttttgaaccatgaaattcctgaattcgatcttattaaagtcaaggaaccggct
gggaagaaaagaaacaagctgaaagccactactaaagttgctgctactgctactgattcc
ccttcttcctcttcttcttcttctttggatgctttgtcaaaaaaaaccagaggcaaaaag
aaaaagacatctaagattgtaaaaaaaggaggtgtacccgattctggtcaatcaaaaggc
aataaaaacgtcaatacgaaagataatgtagagcagcagaaagttaaagatcagaaagtt
ggcaagaacaagaacagaaagaaaagcaagactacagcaaaagatggcgtcgaaaataaa
aaacctgctctgctgcaaacggcaggtgaaaaacaaacagaatctgatagccttgcgaag
caactgaagaacaagagaagaaaaaagaagaaggaaacacaggctaagagcgagaacaac
gaaacaaaagaaaaagaacaaaaaagtacggaatctagtggtacactagagcctaatcgg
ctgaggagacgacgttctagaaaagatcgagtagagactaaacaacaacaacaacaacaa
caacagagtaattcgcatagtgatgatccgcgaccattacgaagagcagaaaatgcaccc
aagaaaccaataaagattcttagctcaaaagctgaaaagcaatcagaagatatttga
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