Lodderomyces elongisporus: PVL30_003743
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Entry
PVL30_003743 CDS
T01116
Symbol
DBP5
Name
(RefSeq) RNA helicase required for poly(A+) mRNA export
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03013
Nucleocytoplasmic transport
lel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVL30_003743 (DBP5)
03015 mRNA surveillance pathway
PVL30_003743 (DBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_003743 (DBP5)
Enzymes [BR:
lel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVL30_003743 (DBP5)
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PVL30_003743 (DBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
5232917
NCBI-ProteinID:
XP_001526351
UniProt:
A5DZX2
LinkDB
All DBs
Position
4:1675644..1677179
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AA seq
511 aa
AA seq
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MSNTKDVDADASNLLASLSVSKEKKEDTSNILAGLSLNGDESNKKEGSGVKDTESDKQKG
NGKVEKVEKDENKDKSQSEAKDDSKRETNLIENRYEVEVKLDDIQADPNSPLYSVKSFEE
LGLKPELLKGLYAMKFNKPSKIQERALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRV
DESIKAPQCICLAPTRELARQTLEVVETMGKYSNITYQLVVPDSVPRGQAISAQVLVGTP
GIVHDLINRKAINVAKVKVFVLDEADNMLDAQGLADTCLRVKKRLPRDCQLVLFSATFPT
EVRKYAEKFVPNANSLALKQEELNVKGIKQLYMDCKNQEHKFEVLCELYGLLTIGSSIIF
VEQKATADSLYLRMKEEGHTVSILHGGLEVADRDRLIDDFREGRSKVLITTNVLARGIDI
ATVSMVVNYDLPRTKEGRPDPSTYLHRIGRTGRFGRVGVSVSFVANEKDYQTLKYIAEYF
GIEDQMTVVPTDDWDEVEKIVTRVIKEKKMT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatacaaaggatgttgatgctgatgcgtcaaacttattagcaagcctttcggtg
tcgaaggaaaagaaagaagatactagcaacatattggccggactatcacttaatggagac
gaatctaataagaaggagggtagtggcgtgaaagatacagaatcagataagcaaaaagga
aatggaaaggtcgagaaagtcgagaaagatgaaaacaaggacaagtctcagtccgaggcc
aaggatgattccaagcgtgagactaatcttattgagaacaggtacgaagtcgaggtgaaa
ttggatgatattcaagccgaccccaattccccgctttactctgttaagtcgtttgaagaa
ttaggtttaaagccggagctccttaaaggtctttatgccatgaaattcaataagccatca
aagattcaagagagagcattacctttacttatttcgaatccgccaaaaaacatgattggc
caatcgcagtcgggtactggtaaaactgctgctttctcattgacgatgctttcacgtgtt
gatgaatcaatcaaagcaccgcaatgtatttgtttagctccaacaagagaattggctaga
caaacattagaagttgttgagaccatgggaaagtattccaacattacttaccaattggtg
gtgccagactctgtgccaagagggcaggccatcagtgcacaagtccttgttggtacgcca
ggtatagtacatgaccttattaatcgaaaagcaatcaatgtggcgaaagtgaaagttttt
gttttggacgaggctgacaatatgttggatgcccaaggtttagccgacacgtgtcttcgt
gtgaagaaaagattaccaagagattgccaattggtattgtttagtgcaacattccctact
gaggtgaggaagtatgctgaaaaatttgttcctaatgctaactcgttggccttgaaacaa
gaggagttgaatgtaaaaggtattaagcaattgtacatggattgcaagaatcaagaacac
aagtttgaggtcttgtgtgaattgtatgggttattgactattggctcatcgatcatattt
gttgagcaaaaagccactgctgatagcttgtatcttaggatgaaagaagagggccatact
gtttcgattttgcatggtggcttggaagttgccgatagagaccgattgattgatgacttt
agggaaggtagatcgaaagtattgattacgacgaatgttttggcaagaggtatagatatc
gccactgtctcaatggtggtcaactacgatttaccacgtaccaaagagggacgtccagac
ccttcgacttatttgcatagaatcggaagaaccggtagattcggtagagttggtgtttct
gtgtcatttgttgccaacgaaaaagattaccaaactttgaaatatattgcagagtatttc
ggcatagaagaccaaatgacggtggtgccaactgatgactgggacgaagtggaaaaaatc
gtcactagagttattaaggaaaagaaaatgacatag
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