Lodderomyces elongisporus: PVL30_003822
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Entry
PVL30_003822 CDS
T01116
Symbol
PRP5
Name
(RefSeq) pre-mRNA processing RNA-helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVL30_003822 (PRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lel03041
]
PVL30_003822 (PRP5)
Enzymes [BR:
lel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVL30_003822 (PRP5)
Spliceosome [BR:
lel03041
]
Complex A
U2 snRNP components
U2 related factors
PVL30_003822 (PRP5)
Complex B
PVL30_003822 (PRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
5233354
NCBI-ProteinID:
XP_001526437
UniProt:
A5E058
LinkDB
All DBs
Position
4:1898294..1901278
Genome browser
AA seq
994 aa
AA seq
DB search
MTLPSGDSSITNNTNQTLNEDEKRRLRREKLAALRQKKLAEAQNGEGNKRQEGNGNGTGQ
GTGNVAADLTTKRNEKQKVENSFAKSNSTSIDHSSTETQATSLEEKQRLLLKRQGQRIED
WKKNRSADTASHFPQRAKENLSHTRIAITKKSTFKLPKIKRNNNKRVFGFVNEDKEGGGG
KEEEDEEEEFTKKKILKIANDDARDYLNYGEKFRKPVSEEAEDDLDQFIESISKSESFVD
NNNGGKQVQEQNVEEEKQQQQQQQLEQEQEQEQEQLEKLPRYLAVNNNNNEDTDEVYRYE
EDFDDEFDEDDEDDINKRLSAKLNKLQNTAKELKEIDHTSIEYPKFRKHFYQVPFEMSTM
DNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMSVIQNDLGFAKPSPIQCQAIP
IVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQSFPKPGEGPIGLVLSPTRELALQIEKE
ILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTT
FVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQLAKKVLHNPIEIIVG
GVSVVASEISQEIILFEDTDQLMNHKIQKLEDILSRFFDLGKNTGKVLVFVEKQTDADKL
VSVLLKKAIPCIAIHGGKDQIDRKHAIREFSDDQSGINVLIATSIAARGLDVRNLDLVVN
FEPPSHLEDYVHRVGRTGRAGKHGEAITFVDNTQEKEISILVKALKMSSRAVDSKLQEIA
DKFMKKIESGEEKRSSGFGGKGLEKLQNVRETNMQLQKKMFGNFKKEDGKKSHRDLSEQV
DYFGSSSSSSSFPSSSNTTTTTTTTSTASAIEIPTFEIIEGNSPETSGPDKCKFYCRVTI
NDLPQKVRWGIVQRESLSKIIEASKTSITTRGQFYPPQSKQTPTNDQPKLYLLIEGLTRK
AVEEAAVLIRDKMLQGVEAMRLDNHSAPTGRYVV
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaccttaccaagtggtgattcttctataactaataatactaaccaaacattaaatgaa
gatgaaaagcgaaggttaagaagggaaaagcttgctgctttaaggcaaaagaaactagca
gaggcacaaaatggagaaggaaataaaaggcaggaaggaaatggaaatggaactggtcaa
gggaccgggaatgtagctgcagatttgactaccaaaagaaatgaaaagcagaaagtggaa
aattcatttgcaaaactgaactcaacttctatagaccactcatcaactgagacacaagct
acttcgctagaagagaagcaacgcttattactaaaaagacagggacagagaatcgaggat
tggaagaaaaacagatcagcagatacagcttctcattttccacagcgtgcaaaagagaat
ttgtctcatacacgaattgctattacaaaaaagtctaccttcaagttacccaagattaaa
agaaataataataaacgagtttttggtttcgtgaacgaagacaaagaaggaggaggagga
aaggaggaagaagatgaagaggaagaatttacgaaaaaaaagattttgaaaattgcaaat
gatgatgcaagagattatttaaactatggtgaaaaattccgcaagccagtactggaagaa
gcggaggatgatcttgatcaatttatcgaatccatcagcaagtcagaaagttttgtagat
aacaacaacggtggcaaacaagtacaggaacaaaacgttgaagaagagaagcagcagcag
cagcagcagcaactagaacaagaacaagaacaggaacaggaacaactagaaaaacttcca
cgatacctagcggtaaataataataacaatgaagatactgatgaagtttatagatatgag
gaagattttgatgacgaatttgatgaggatgatgaggacgatattaacaaaaggttgagt
gcaaaactcaataagttgcaaaacactgcaaaggaacttaaagagattgatcacacatcc
atcgagtatccaaaatttagaaaacatttctaccaagtaccctttgagatgagcaccatg
gacaatagagaacttgacatgctacgattagaacttgataatgtgcgtgcacgaggtaaa
aatgtgccaccaccatttttgacctggggccaactattaatgccagaaagtgttatgtca
gtaatccagaatgacttggggtttgccaaaccatcgccaatacaatgtcaagcaattccg
attgtactatcgggaagagatatgattggcgtagcaaaaaccggttctggtaagactttg
tcatatgtcttaccaatggtacgccatattcaggaccaactgtttcctaaacctggcgag
ggtcctattggattagtcttgagccctacaagagaattggcgcttcagattgaaaaagag
attttgaagtttagctctacgatggatctaaaagtatgttgttgttatggcggttcaaat
atcgaaaatcaaattagtgagttgaagcgaggtgtgaatgttattgtagcaactcccggt
agattgattgatcttttagcggccaacggaggacgaataaccaccttacgacgtacgact
tttgtcgtcttggacgaagcagaccgtatgtttgatatgggattcgaacctcaaattcaa
aagatatttactcagatccgtccagataagcaaactgtgttattttcggcaacattccca
cgcaagctcgaacagttggcaaagaaagtgttacacaatccaatcgagatcattgttggt
ggagtaagtgttgttgcttctgagatttctcaagaaattatattgtttgaggatacggac
caattgatgaatcacaagatacagaaattggaggatatattgagcaggtttttcgacctc
ggaaagaatactgggaaagtgcttgtatttgttgagaaacagaccgatgcggacaagtta
gtttcggtgttattgaagaaggctattccgtgtattgcaatacatggaggcaaggatcaa
atagaccgaaaacatgcaatccgtgaattttccgatgaccaaagtggaattaacgtcttg
atagcaacctcaattgcagcgcgtgggttggatgtaagaaacttggatttggttgtaaac
tttgaaccaccctcgcatttggaggactatgtgcacagggtgggaagaactggtagggct
ggcaaacacggagaagcaatcacatttgtcgataatacacaagagaaagaaatcagtatt
ttagtcaaagcattgaaaatgagttctcgtgccgttgattcaaagttgcaagagattgca
gataagtttatgaaaaaaatagaatccggcgaagagaagcgcagttctggttttggtggt
aaagggttggaaaagttacagaatgttagagagacaaatatgcaattgcagaagaaaatg
tttggaaactttaaaaaagaggatggcaaaaagagccaccgtgacctttctgagcaagtt
gattactttggctcatcatcgtcatcatcatcttttccttcttcttccaatactactacc
actaccaccaccaccagcaccgccagtgcaattgagatacccacctttgaaatcattgaa
ggaaactcaccagagacatcaggtccagataaatgtaaattttattgcagagttactatc
aatgacttgccacaaaaagttagatgggggattgttcaaagagaatcattatccaagatc
attgaggcgagcaagacatccatcacaactagaggccaattttatccacctcaatcgaag
caaactcctacaaatgaccaacccaagttgtatttgttaattgaaggtttgaccaggaaa
gccgtggaagaagcggctgtgttgattcgtgacaaaatgcttcaaggagttgaggctatg
agacttgacaaccactccgctcctacagggaggtatgtagtctag
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