KEGG   Lysobacter enzymogenes M497-1: LEN_0997
Entry
LEN_0997          CDS       T04598                                 
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
lem  Lysobacter enzymogenes M497-1
Pathway
lem03030  DNA replication
lem03430  Mismatch repair
lem03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LEN_0997 (holC)
   03430 Mismatch repair
    LEN_0997 (holC)
   03440 Homologous recombination
    LEN_0997 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lem03032]
    LEN_0997 (holC)
   03400 DNA repair and recombination proteins [BR:lem03400]
    LEN_0997 (holC)
Enzymes [BR:lem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LEN_0997 (holC)
DNA replication proteins [BR:lem03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LEN_0997 (holC)
DNA repair and recombination proteins [BR:lem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LEN_0997 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi P-loop_SecA
Other DBs
NCBI-ProteinID: BAV96484
UniProt: A0A1J1E8Z9
LinkDB
Position
complement(1141332..1141757)
AA seq 141 aa
MARADFYLIQSPRFKEEPLRLVCELARKAHAANLPTLILARSAEQAEQLDDLLWDMGEDA
YIPHQIAGLDEDEDEAEVLIAAPDSDTALRPLVINLRDAAVADGFERVLEVVPADDSARG
PLRERWKQYQARGLQLNKHDM
NT seq 426 nt   +upstreamnt  +downstreamnt
atggcccgcgccgacttctatctcatccaatcgccgcgcttcaaagaagaaccgctgcgc
ttggtctgcgagctggcgcgcaaggcccacgccgccaatctgccgaccctgatcctggcg
cgcagcgccgagcaggccgaacagctcgacgacctgctgtgggacatgggcgaggacgcc
tacatcccgcaccagatcgccggcctggatgaggacgaggacgaggccgaagtgctgatc
gccgcgcccgacagcgataccgcgctgcgcccgctggtgatcaacctgcgcgacgcggcg
gtggccgacggcttcgagcgcgtgctggaagtcgtgcccgccgacgacagcgcgcgcggc
ccgctgcgcgagcgctggaagcagtaccaggcgcgcggcctgcagctcaacaagcacgat
atgtag

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