Lysobacter enzymogenes M497-1: LEN_0997
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Entry
LEN_0997 CDS
T04598
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03030
DNA replication
lem03430
Mismatch repair
lem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LEN_0997 (holC)
03430 Mismatch repair
LEN_0997 (holC)
03440 Homologous recombination
LEN_0997 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lem03032
]
LEN_0997 (holC)
03400 DNA repair and recombination proteins [BR:
lem03400
]
LEN_0997 (holC)
Enzymes [BR:
lem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LEN_0997 (holC)
DNA replication proteins [BR:
lem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LEN_0997 (holC)
DNA repair and recombination proteins [BR:
lem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LEN_0997 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BAV96484
UniProt:
A0A1J1E8Z9
LinkDB
All DBs
Position
complement(1141332..1141757)
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AA seq
141 aa
AA seq
DB search
MARADFYLIQSPRFKEEPLRLVCELARKAHAANLPTLILARSAEQAEQLDDLLWDMGEDA
YIPHQIAGLDEDEDEAEVLIAAPDSDTALRPLVINLRDAAVADGFERVLEVVPADDSARG
PLRERWKQYQARGLQLNKHDM
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgccgacttctatctcatccaatcgccgcgcttcaaagaagaaccgctgcgc
ttggtctgcgagctggcgcgcaaggcccacgccgccaatctgccgaccctgatcctggcg
cgcagcgccgagcaggccgaacagctcgacgacctgctgtgggacatgggcgaggacgcc
tacatcccgcaccagatcgccggcctggatgaggacgaggacgaggccgaagtgctgatc
gccgcgcccgacagcgataccgcgctgcgcccgctggtgatcaacctgcgcgacgcggcg
gtggccgacggcttcgagcgcgtgctggaagtcgtgcccgccgacgacagcgcgcgcggc
ccgctgcgcgagcgctggaagcagtaccaggcgcgcggcctgcagctcaacaagcacgat
atgtag
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