Leclercia sp. Colony189: GNG29_03080
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Entry
GNG29_03080 CDS
T06321
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ler
Leclercia sp. Colony189
Pathway
ler00521
Streptomycin biosynthesis
ler00523
Polyketide sugar unit biosynthesis
ler00541
O-Antigen nucleotide sugar biosynthesis
ler01100
Metabolic pathways
ler01110
Biosynthesis of secondary metabolites
ler01250
Biosynthesis of nucleotide sugars
Module
ler_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GNG29_03080 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GNG29_03080 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GNG29_03080 (rfbC)
Enzymes [BR:
ler01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GNG29_03080 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QGW15571
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Position
complement(645396..645944)
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AA seq
182 aa
AA seq
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MNVIQTAIPDVFIFEPKVFGDDRGFFFESFNHQQFEAAIGRSVNFVQDNHSKSSKGVLRG
LHYQLAPHAQGKLVRCVAGEVFDVAVDIRKSSPTFGQWVGVHLSGENKRQLWIPEGFAHG
FMTLSDSAEFLYKTTNYYAPESDRGIRWNDETIGITWPEIDSEILTSAKDSVAKSFPDAE
YF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattcagaccgcaatccccgacgtgtttatctttgagccaaaagtgtttggc
gatgaccgtggctttttcttcgaaagctttaaccaccagcagttcgaagctgccattggc
cgcagcgtcaacttcgtgcaggacaaccactctaaatcctcaaaaggcgttctgcgtggc
ctgcactaccagctggcgccacatgcgcagggcaaactggtgcgttgcgtggcgggtgaa
gtcttcgacgtggcggtggatatccgtaaaagctccccgaccttcggtcagtgggtgggt
gtgcatctgtctggcgagaacaagcgccagctgtggatcccggaaggtttcgcccacggc
tttatgaccctgagcgactccgcagagttcctgtataaaaccaccaactactacgcgccg
gagagcgaccgcggcatccgctggaacgatgagaccattggtattacctggccagaaatc
gacagcgagatcctcacctccgccaaagacagcgttgccaaatccttccctgacgcagag
tacttctga
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