Leucoraja erinacea (little skate): 129693955
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Entry
129693955 CDS
T09122
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03022
Basal transcription factors
leri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129693955 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
129693955 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129693955 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
leri03400
]
129693955 (gtf2h4)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129693955 (gtf2h4)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129693955 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
129693955
NCBI-ProteinID:
XP_055486651
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MQREKLQCKNLHDYMRSLSPAILDKLYNHPATCLAVFRELPPLARNYVMRLLFLDQPLPQ
AAVTFWVKKDNQRDHDDCMGIVTGLRLWHSQQLPGGLQGLVLNPIFKENLRIALLGGGKA
WADDTSQLGPDKHARDITSLDKYAMERWEVILHFMVGSPSAAVSQDLSQLLIQAGLMKSE
GTEAPCITSAGFQFLLLDTSSQLWYFMLQYLHHCQTRKMDLVEILSFVFQLSFSTLGKDY
SVEGMSESLLTFLQHLREFGLVFQRKRKSRRFYPTRLAINLALGVTGSAVDVHRQGYIVV
ETNYRIYAYTDSELQLALVALFSEMLYRFPNLVVAQLSRESVQQSIANGISAEQVDHPHF
LRTRAHPVCLPQTPVLPPTITDQVRLWELERDRLQFTEGVLYNQFLSQVDFELLRDYARD
LGVLVWENPPMRLMVVTPTGHPDVKRFRKRQKHN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtgagaagctgcaatgcaagaacctgcacgattacatgcgcagcctcagccct
gccatcttggacaagctgtacaaccatcccgccacctgcctggccgtcttcagggagttg
ccaccactggcccgcaactatgtgatgcggctgctgttcctggaccagcccctgccccag
gctgccgtcaccttctgggtcaagaaagacaaccagcgagaccatgatgactgtatgggc
atcgtgacaggtctccgtctctggcattcccagcagcttcccggtggtctccagggactg
gtcctcaaccccatcttcaaggagaacctacgcatcgcgctcctcggcgggggtaaggca
tgggctgacgacaccagccaactggggccggacaaacatgcccgagacatcacctcactg
gacaagtacgccatggagcggtgggaggtgatcctgcatttcatggtgggctcacccagt
gcagccgtcagccaggatctgtcccagctcctcatccaggccgggctcatgaagagtgaa
gggacagaagccccttgtatcacatctgctggcttccagttcctgctcctcgacacctcc
tcccagctctggtacttcatgctccagtacctgcaccactgccagacacgaaagatggac
ctggttgagatcctgtcatttgttttccagctgagtttctccacgctgggcaaggattat
tcggtggaggggatgagtgagtcgctgttgaccttcctgcaacatctgcgtgagtttggg
ctggtcttccagaggaagcgtaagtctcggcggttctacccgacgcggttggccataaac
ctggcgctgggtgtgacgggcagcgcggtggatgttcaccggcagggttacatcgtggtg
gagaccaactatcgtatctacgcctacaccgactcagagctccagctggccctcgttgcg
cttttctccgagatgctttaccggttccccaacctggtggtggctcagctgagcagagag
agtgtgcagcagtctattgctaacgggatcagtgccgagcaggttgatcatccccacttc
ctgaggaccagagctcaccctgtttgtctcccacagaccccggtgctgcctcccaccatc
accgaccaggtgcggctctgggaactcgaacgtgaccggctacagttcaccgaaggtgtg
ctgtacaaccagttcctgtcgcaggtggactttgagttgctgcgtgactatgcgcgggac
ctgggggtgctggtgtgggagaatccccccatgcggctgatggtggtcacccccaccggc
caccccgacgtcaaacgcttcaggaaacggcagaaacacaactga
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