Leucoraja erinacea (little skate): 129697894 Help Entry 129697894         CDS       T09122                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism leri  Leucoraja erinacea (little skate) Pathway leri04510   Focal adhesion leri04512   ECM-receptor interaction leri04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:leri00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129697894  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     129697894   09142 Cell motility    04820 Cytoskeleton in muscle cells     129697894  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:leri04147]     129697894    00536 Glycosaminoglycan binding proteins [BR:leri00536]     129697894 Exosome [BR:leri04147]  Exosomal proteins   Exosomal proteins of other cancer cells    129697894 Glycosaminoglycan binding proteins [BR:leri00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129697894 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  129697894 NCBI-ProteinID:  XP_055492591 LinkDB All DBs Position 6:12208932..12381582 Genome browser AA seq 1671 aa AA seqDB search MVPQMRWLLPAILLLAQARGSEAAACHGCTSNTKCDCSGVKGEKGTMGLPGFAGPLGMPG FPGVEGPLGAPGSKGDSGEPGLTGKKGIRGPTGVPGFPGTPGIPGLPGQDGPSGPHGIPG CNGTKGESGPLGPSGLPGIQGIPGNHGVPGTKGDPGEVIGYPILKGDPGLPGHPGKMGIP GQPGPIGPAGPIGYPGPMGPPGIPGLPGPKGNMGVHFHGQKGDKGEPGVQGPAQPYTPES QEGGKETTLQRGDKGEKGEKGNDGLKGLPGNQGHSYVGMKGNKGEMGEPGKRGKPGKDGE PGLPGQTGPFGYPGEPGLYGLNGTKGEKGSQGLNGPPGAITDEQGRPIHGTQGIQGVQGY SGEKGERGFSGPPGIIGIPGPPGLPLQGERGLPGYTGERGLKGDKGEAGISKPGLPGNAG IRGFPGAPGPPGPLVSNEDCTSVPGPKGAEGSRGFQGETGMKGVKGDTCFHCNATVLSGP TGPQGPPGRTGDPGFPGIKGDQGTTGRVGFPGQPGGPGFPGRMGIPGPKGDPGDIHALPG LKGDKGEGGFPGRPGVPGVDGIHGKDGAPGQPGLKGEPATIGFKGEPGLSGSPGINGLRG DQGPPGRPGAGERGFPGEKGIQGFPGRPGLPGALGLKGESGQSIGVSGPAGATGTPGLNG HPGSRGDPGLPGPLGPQGATGPKGDPGLPGIGFPGPTGAKGADGIPGDLGHPGIPGLAGK DGLPGAPGFPGEKGLPGLGLQGPQGYPGAHGLDGIPGPKGDPGFPGIPGGPGQQGLPGFQ GIKGNIGTGGAPGRPGPPGPPGSGLPGRPGEPGPRGPSGPLGNLGPPGTKGDPGFPGLDI PGPQGEKGFTGLKGLPGPPGFPGQVGTSGREGLPGLQGPKGEMGVMGAPGGQGIPGVPGS LGASGTKGNPGLPGFPGTPGSTGEKGTKGETGLAGQPGVLDKHEMEKMKGEKGDIGESGK SGFPGTKGYQGIPGEPGMPGKDGEPGLPGQSGSVGDPGSPGEPGSSGFPGEKGSIGEMGY PGTSGPAGLPGNTGKPGNPGFPGVSGEKGIKGDPGRPGYGIPGERGQKGDPGLPGFPGDP GLTGDSGLPGLLGTLGPTGPKGSSGPPGIPGNPGLPGSKGGVGLPGEQGLSGIPGQPGTT GPSGTPGDPGEKGSTGLDGIPGAIGEKGNPGFPGRDMPGQPGHSGPKGVKGDIGLPGFPG SSGVSGRKGEQGFIGSKGNAGDPGPPGPPNRALEGPKGEKGLAGDQGLPGHPGIPGLQGT PGFNGSKGAKGLQGSPGYHGYPGPKGELGFPGLPGNVGRSGAHGLMGDPGPHGVPGFVGM KGTSGPPGLPGAQGDRGHTGNPGAPGPAGPQGPLQIVKGVAGLPGPPGQDGVKGYQGVSG IKGDPGFPGQPGVAGDDGPLGLEGRPGLKGDAGPIGPAGPQGYPGPVGVEGMPGPRGFPG PASIAHGFLVTRHSQTTDIPSCPHGTSKIFEGFSLLYVQGNERAHGQDLGTAGSCLRRFS TMPFLFCNINNVCNFASRNDYSYWLATPEPMPMSMAPVIGQTIKPFISRCSVCEAPAMVI AVHSQTIQIPLCPNGWHSLWIGYSFMMHTSSGAEGSGQALSSPGSCLESFRTAPFIECHG RGTCNYYANSYSFWLATVETTEMFRKPESETLKAGELRTRISRCQVCMKKT NT seq 5016 nt NT seq  +upstreamnt  +downstreamnt atggtccctcagatgcgctggctgctcccggccattctcctcctggctcaggctcggggc tcggaggcagcggcctgccatggatgcacttccaacaccaaatgtgactgcagtggtgtc aaaggagaaaagggtacgatgggattgcctggttttgcagggccgctgggaatgccagga ttcccaggagtagaaggaccacttggggctcccgggtcaaagggagactcaggcgaacca ggtctcacggggaaaaagggaatccggggtccaactggagtccccggattcccaggaacc ccagggatacctgggctgccaggccaggatggtccttccgggccacatggtattccagga tgcaacggcacaaagggtgaatcaggtccgctcgggccatctgggttgccaggaatacaa ggaattccgggtaatcatggcgttcccggaacaaagggagacccaggagaggtgattggt tatccaatattgaagggtgacccaggacttccaggacatccgggaaaaatgggcatccct ggtcagccggggcctatcgggcctgcaggacccattggctatccaggacccatgggcccc ccaggaatcccaggactccctggaccaaagggcaacatgggagtgcattttcatggacag aagggtgacaagggtgagccgggggttcaagggcctgcacaaccttatactcctgaatcg caagaaggaggaaaagaaacaactttgcagagaggagataagggagagaaaggtgagaaa ggcaatgatggcctcaaaggtttacccggaaaccaaggacattcgtatgtcgggatgaag gggaataaaggagagatgggtgagccagggaaacggggcaaacccggcaaggacggagaa ccagggctcccaggacaaaccggtccattcggttatcctggcgaaccaggcctttatggg ctgaatggcaccaagggagagaaaggcagtcaaggactgaatggccccccaggagccatc actgatgaacaaggaaggcctattcatggcacgcaaggaatacagggggtccaaggctac tccggagagaaaggtgaacgaggcttttcaggccctccgggaattataggaataccaggc cctccaggtttgcccctgcaaggtgagagaggcctgccgggatacactggtgaacggggc ctgaaaggtgacaaaggagaggcgggaatatcaaagccaggcttaccagggaacgccggc atcagggggtttcctggtgcccccggaccccctggacctctagtgtctaacgaagattgt acaagtgtgcctggaccaaagggtgctgagggatctcgtggtttccaaggagaaacggga atgaaaggggtcaagggagatacgtgcttccactgcaatgcaaccgtgctgtcagggcca acgggtccccaaggccctcctggtagaacaggtgatcctggtttcccagggatcaaggga gaccaaggaacaacaggaagagtcggattcccagggcaacccggtggtcccggcttcccg gggcggatgggaatccctggacccaaaggagaccccggtgacatccacgctttaccgggt ttgaaaggagacaagggtgagggaggcttcccgggcagaccaggagtgcccggagtggat ggaattcacgggaaagatggagcccccggacagccagggctcaagggtgagcctgcaaca attggcttcaagggagaaccaggactgtccgggtccccggggattaatggtctacgagga gaccagggacctccgggccgtccaggagcgggagaacgaggcttcccaggagaaaaaggc atccagggcttcccaggacgtcctggactacctggggcactaggtctgaaaggtgaatca gggcaatcgattggtgtgtcaggacctgctggagccacaggcaccccgggactgaatggc catccagggagcagaggtgaccctggactgccaggtccccttggtcctcagggagccact ggaccaaagggggatccggggctgcctgggataggatttcctggcccaactggggcgaaa ggtgcggatggaattcctggagatctgggtcatcctggaattcctggactcgctggaaaa gatggtctgcctggtgcacctgggttcccaggagagaagggactgccgggattgggactt caagggccacagggatatccaggcgctcatggactggatgggattccaggacctaaaggg gatccgggattccccgggataccgggcggaccaggacagcaaggtctccctgggttccaa ggcattaaaggtaacattggtacaggaggtgctccgggccgtccgggacctccaggacct ccgggaagtgggttgccaggccgaccgggcgagccaggaccacgtggaccatccggcccg ttaggaaaccttggaccccctggaaccaagggagaccctggtttcccaggcctggacatc ccgggtccacagggagagaaggggttcacgggcctaaaaggtctccccgggcccccaggt ttcccaggccaggtcgggacatcgggcagagaaggacttcctggattacaaggtccaaaa ggagaaatgggagtcatgggtgcccctggaggccaaggtattccaggagttccagggagc ctgggagcgtcgggtaccaaaggtaacccaggtttgccgggcttccctgggaccccaggc agcacgggcgagaaaggcacgaagggggaaactggtttggcgggacagccgggtgtgttg gacaagcacgaaatggagaaaatgaaaggcgaaaaaggagacattggggagtcagggaag agtggttttccaggaaccaagggttaccaaggcattcccggcgagcccggaatgccagga aaagatggcgagcctggattaccaggacagtcagggtcagtgggtgatcccggaagtcca ggagaaccagggtcctcgggattccctggagagaaaggatcgatcggagaaatgggctat ccaggtacctcgggacctgccggcctcccggggaacacgggaaaaccaggcaaccctggc tttcctggggtgagcggggagaaaggtataaagggagatcctggtcggccaggatatggg atcccaggtgaacggggtcaaaagggagatccggggttgccaggttttccaggtgatccg ggactgacgggtgattctggtttgcccggcttgctgggcacgcttggtccaacggggccg aaggggtcttcgggcccaccaggaattccaggtaatccaggactacccggcagtaaaggt ggcgtcggactcccgggcgaacagggcttgtctggaatcccaggacaaccaggtaccaca ggaccttcgggaactccaggagatccgggagagaaaggctcaacaggtcttgatggaatt cccggtgccattggcgagaaaggcaatccaggtttcccgggaagagacatgcctggacaa ccaggacattccggaccaaagggtgtgaagggtgacattggcttaccgggtttccctgga tcgtcgggagtttcaggcagaaaaggagaacaaggattcataggcagcaaaggcaacgct ggcgatccaggaccccctggtccacccaacagggctctggagggccccaaaggagagaaa ggccttgccggagaccaaggtctgccagggcaccctggtataccggggctgcaaggaact ccaggattcaacgggagcaaaggagccaaaggcctgcaggggtctccaggttaccatggc taccctgggccgaagggagaattgggtttcccaggattgcccggtaacgtcgggcgctct ggagcacatggactgatgggtgacccagggcctcatggagtcccaggctttgttgggatg aaaggcacttcagggccccctggattaccaggcgcgcaaggtgacagaggacatactggg aatccaggtgctccaggccccgctggacctcagggtccgctacagattgtaaagggcgtg gctggattgcctggtccgccaggacaggacggagtaaagggatatcaaggggtgtcagga atcaaaggcgacccaggtttcccaggccaacctggtgttgccggtgatgatggacctctg ggcttagaaggcagacctgggctaaaaggagatgcgggaccaattgggccagcaggtcca caaggatatccaggaccggtgggtgtggaaggaatgcctggacctcggggattccccggc cctgcgtccatcgctcacggcttccttgtcacacgacacagccaaacgacggacattccc agctgtccacacggaacgtcgaagatcttcgaggggttctccctgctatacgtgcaaggc aatgagagggcccatggccaggacttggggaccgcggggagctgcctgcgaaggttcagc accatgcccttcctcttctgcaacatcaacaacgtttgcaactttgcctcaaggaacgac tactcctactggctggccacgcccgaacccatgcccatgagtatggctcccgtgattggt caaaccatcaagccattcatcagcagatgctccgtgtgtgaagctccggccatggtgatt gctgttcacagccagacaattcaaatcccgctctgccccaacggctggcattccctgtgg atcggatactccttcatgatgcataccagttctggcgccgagggctccggacaagcctta tcgtcccccggctcctgcctggaatccttccgcaccgccccattcatcgagtgtcatggc cgtggaacatgcaactactacgcaaactcctacagcttctggctcgccaccgtggaaacc acagagatgttcaggaaaccggaatcagagacactgaaggcaggggaactgcggacgcga atcagccgctgtcaagtctgcatgaagaaaacgtaa

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