Leucoraja erinacea (little skate): 129698419
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Entry
129698419 CDS
T09122
Symbol
rnf17
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129698419 (rnf17)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129698419 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
KGK
Dak1
Motif
Other DBs
NCBI-GeneID:
129698419
NCBI-ProteinID:
XP_055493540
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All DBs
Position
6:complement(50571693..50663823)
Genome browser
AA seq
1562 aa
AA seq
DB search
MDDARAQMDGAGSGRHVAAVKMAEEGSASSEEQSQPLERELHQKCMCTTEELSVVCFEQE
NDAINEELCKMLCERDQFNKLVQRVEGIGFSIEKERNGIRNEMHKEFEKINQSVKNRKDM
LLKELEFIVQQYLIVTGKVQKLLGEKINALDSAMQDEVEPKHESLSTYCNKQQIIENLKN
LDQVKHIVEMLESRIDLGFQIQPGPLIKALENLGKIELGTKMFLASQTENALFNDFLEKN
IKQNCPLREGWDLASYKNESSEIKLDSVMDYNVNESEIMVSQLGNGPAFDEISSLHNQDK
LCLVRDTDIVEEILEDNKSNVIVDNDREFLRPVLKRPKQSFYRKCISDFSFCCKAGFRGL
VSVSHVINPCHFYVQKSSDKKKAAILATEAGTLCSSMDMQKCPVSVLELDEKIIVRSNIF
HAWCRGTITELVPSGNKEEKCNNSTSYEITDVAVIQVFLLDFGHSEIFSLPGIDIPEKKL
EDVVHVYTHVHDFSHYVRKLNPQLKGPLKNIPPLAIKCSLKDIVPANPNNIWNVEARTEF
TRIVDNKAVQMIVLGKDGDKLLVDLKKSPMDKMGSDVPVSLRDALVFLELARFVSECLVP
MSNLETNELPMQYYLPVIPPFLKESQIMVTHINNPLDFYIQLIDNVDLLILTRNMFELYN
GKDANLEILCPVVGQACAALFDDGGWYRCQINGLPGHREVDVKYVDYGNTARIPATNIRK
LKRDFLTLPIQALQSRLSDVEPVNTTEGWSDCVKERFEHLTLNKCMWCMTGESLGNALSV
YLFDSTTQVNGTKSCINNILVEENLAHFTQNHSTGFFMEHNKSTVNVKQINKSEELDVFR
DVVQSHLFEGMDSCVEGPSKNAFDLATHVVVKVTFVASPSNIFVQSLVSQHLLKDLQEEM
KDVYSSLEHNEVEWEENRDCVVLVSKTKEWRRGKVTKKISDKIVEVFCYDFGNKEMVNSC
KLRQLKEEFQFEPLALECCLSSIRPAGGSLKWAATSCDFLEDILIESSVLMKIEEKDIQH
LEKRTDCCGVANEKGSSSKSPLPVKLYTKDEIGQFVNIAQYLIEKGLALPQNISTAPDTK
DVQYKMKQTDRHESLGLAPENIEYLAPGYEDCTSKKVYKSPVVPNMNIFDIEVTGVGDGG
IIYGMPLSSKDQFTMLTGASFKVLPFLKPYCYRKNEGCVVKGLDALWYRGRILEVIGGSV
MVHYVDGGYTETIPQCHVYPELMHPEIPELCLPFQLHGVTPVGNKWQEDAIDTLRELLVQ
RILEVEIMVPSEICPPALLVDLRLDGMSVSCFMIHHNHAVQTIKAALTLKKDSLGLNEEN
IPEENWDLTFESLLSSQFEMVMLPEYDYPLLPMPGKAFPVTVKHLETPNQVYISLGTRKN
VGSDSDTDDSGISYESEDDLEQSLRELNPNAEALPLLTDFRSEMPCLVEYSDGRWYRAKV
LSLDKLHPLTILVQHVDFGSTALLPHTRLRQIPAQLVQYPARAIKVKLAGFKPPALMNEM
DRLAYSPEWSMEALWTMIDIVQENQLTAFLVSSHPEVSVFLYEEESLIHLSLVEKGLADL
DM
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgcgcgagcacaaatggacggcgcgggaagcgggcgtcacgtggccgctgtc
aaaatggcggaggaagggtcggcgagcagcgaggaacagtcgcagcccctcgaacgggaa
ttacaccagaaatgcatgtgcacaaccgaggaattgagtgttgtctgctttgaacaggaa
aacgatgcaattaatgaggaactttgtaaaatgttatgcgaacgagatcagtttaataaa
ttagttcagagggtggaaggaattggcttttcaattgaaaaagaacgtaatggaattaga
aatgaaatgcataaagaatttgaaaaaattaaccagtctgtgaagaacaggaaggatatg
ttgttaaaagagctagaattcatagttcagcaataccttattgtaactggtaaagtccag
aagctacttggggagaaaattaatgctttagactctgccatgcaagatgaagtggagccc
aaacatgaaagtctctcaacatattgtaataaacagcagattattgaaaatttgaaaaac
ctagatcaagtaaaacatattgtagaaatgctcgaatctagaattgatcttgggtttcaa
atccaaccaggccctttaataaaggcccttgaaaacttaggaaaaattgaattgggaaca
aaaatgtttctcgcttcacagacagaaaatgcattgtttaatgattttttggaaaaaaat
ataaagcaaaactgtccacttagagaaggatgggatcttgctagttacaaaaatgaatct
tccgaaataaagttggattctgtaatggactataacgtgaatgaatcagaaataatggtt
tcgcagctgggaaatggcccagcatttgatgaaatttcttcattacacaatcaagacaaa
ttatgccttgtaagagatacggatattgttgaagaaatacttgaagataacaagtcgaat
gtaattgttgataatgatcgagaatttcttagaccagtattaaagagaccaaagcaaagt
ttttacaggaaatgtatttcagacttcagcttttgctgtaaagcaggttttcgtggattg
gtttctgtcagtcatgtgataaatccatgccacttttacgttcagaaatcttcagacaaa
aagaaggctgctattttggctacagaagcaggcacactctgctctagtatggatatgcaa
aaatgtcctgtatctgttctggagcttgatgagaaaattattgttagaagcaatattttt
catgcatggtgcagaggaactatcacagaactggttccatcaggaaacaaagaagagaaa
tgtaacaattctacaagttatgaaataactgacgttgcagtaatccaagtgtttttgttg
gattttggacactcggaaatcttttcacttccaggaattgacattcctgagaagaagttg
gaagatgttgtgcatgtttacacacacgtccatgacttcagccattatgtacggaaattg
aacccccaactgaaaggaccgttaaaaaatatacctccattggcaatcaaatgctcatta
aaagatattgtgccagcaaatccaaataacatttggaatgtggaagcgaggactgaattt
actcgaattgtggataacaaggctgtacaaatgatagttttaggaaaggatggagacaaa
ctgcttgtggatttgaagaagtctccaatggataagatggggagtgatgttcctgtatca
ctaagggatgctcttgtttttttggaactagccaggtttgttagtgaatgtcttgttccc
atgtcaaatctggaaaccaatgagttaccaatgcagtattatctaccagttataccacct
ttcttaaaagagagtcagataatggtcactcacatcaacaatccattggatttctatatt
cagttgattgataatgtggatcttctcattcttacaagaaacatgtttgaattgtataat
gggaaagacgccaatttggagatcttgtgcccagttgtaggacaagcgtgtgctgcacta
tttgacgacggaggttggtacagatgtcaaattaatgggttgcctggacatcgagaagtt
gatgtcaaatatgtagattatggcaacactgcaagaataccagcaacaaatatacgaaaa
ttaaaaagggacttcctaactttaccaatacaggctttacagtctagactgtcagatgtg
gaacctgtcaacactacagaaggctggagtgattgcgtaaaagaaagatttgaacatctt
acactgaacaagtgcatgtggtgtatgactggtgaatccctgggaaacgcattatcagtt
tacttatttgattcaacaacacaagttaatggaactaagtcttgtataaacaatatccta
gttgaagaaaacctggcacactttacacagaaccattccacaggtttctttatggagcac
aacaaaagcactgtgaacgtaaaacaaataaataagagtgaagaactagatgttttccgg
gatgttgtacaatctcatttgtttgaaggaatggactcgtgtgtggaaggaccaagtaaa
aatgcttttgatttggccacgcatgttgttgtaaaagtcacatttgtggcatcgcccagc
aatatatttgttcaatcattagtatctcaacatctactgaaagatttgcaggaggaaatg
aaagatgtgtattcatcattagaacacaatgaggtcgaatgggaagaaaatagggactgt
gtagtcttggtttctaagaccaaagaatggcgacgaggaaaagtcaccaaaaagatttca
gacaaaattgtggaggtgttctgctatgactttggaaataaagaaatggtgaacagctgc
aaattaaggcagcttaaagaagaatttcagtttgaacctctggcacttgaatgctgtcta
tcatccatcagaccagctggagggagtttaaagtgggcagcaacatcatgtgattttttg
gaagatattctgattgaaagttcagttcttatgaaaattgaggagaaagatatccaacat
ttggagaaaagaactgattgttgtggtgtggccaatgaaaagggatcatcttcaaagtca
cctctgcctgtgaagctgtacacaaaggatgaaattggacagtttgtcaacattgcacag
tacttgatcgagaaaggcctggccttgcctcagaacatttcaactgcaccagatactaaa
gatgtacagtataagatgaagcaaactgacaggcatgagtcattgggcctggcacctgaa
aatattgaatatctggcacccggttatgaagattgcacatctaaaaaagtgtacaaatca
cctgttgtaccaaatatgaatatttttgacattgaagtaacaggggtcggtgatggtgga
atcatctatggaatgccattgtcatcaaaagatcaattcaccatgttgactggtgctagc
tttaaagttttaccatttctgaaaccatattgctatcgcaaaaatgaaggatgtgttgtt
aagggcttggatgcactgtggtatagaggaaggattttggaagttattgggggatctgtc
atggtacactacgttgatggtggatacactgaaacaatcccccagtgccatgtttatcct
gagcttatgcatcctgaaattccagagctttgcctgccatttcagcttcatggtgtgact
ccagtaggaaacaagtggcaggaagatgctatcgacactttgagagaattacttgtacag
agaatattagaagttgaaatcatggtgccgtcagaaatttgcccaccagcattattagtt
gatcttcgcttagatggaatgtctgtttcctgctttatgattcatcacaatcatgctgtt
caaactataaaagctgctttaacattgaagaaagattcacttggtttaaatgaagaaaat
atacctgaagaaaactgggatttgacatttgaaagcttactatcttcacagtttgaaatg
gtcatgttaccagagtatgattatccactgttgcctatgccgggaaaggctttcccagta
actgtaaagcacctagaaactcccaatcaggtgtatatctcccttggtacaaggaaaaat
gttggatccgacagtgataccgatgatagtggcataagctatgagtctgaagatgatctt
gagcaatctctgagggagcttaatccaaatgcagaagctcttcctttacttacagatttc
agatctgaaatgccttgccttgttgaatatagcgatgggcgatggtacagagcaaaagta
ctatcactggataaacttcatccattgacgattcttgtacagcatgttgattttggctcc
actgcattgcttccacatacaaggcttcgacagatccctgcacagttggtgcagtatcca
gcacgagccatcaaagtcaagcttgcaggttttaaaccaccagctttaatgaatgaaatg
gaccgacttgcttacagcccggagtggtccatggaagctctatggactatgattgacatt
gtacaagagaatcaacttacagcattcttggttagttcacatccagaagtctcggtattc
ttgtatgaagaagaatcattgattcatctttctcttgtggaaaagggtcttgcagatttg
gatatgtga
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