Leucoraja erinacea (little skate): 129699376
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Entry
129699376 CDS
T09122
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129699376
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129699376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
SPRY
zf-C3HC4_4
PRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
U-box
zf-RING_10
zf-Nse
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129699376
NCBI-ProteinID:
XP_055495072
LinkDB
All DBs
Position
8:complement(17418984..17435961)
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AA seq
567 aa
AA seq
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MATATVSLSRDSLACPICLELLNEPVTLPCGHSFCRGCIGRHWEMQQSGGCSCPSCRRSF
EPRPWLGTSTLLAQIVCGLAQGAPPPAAAGPGDVTCDSCPRQQPLKAERSCLQCLASYCQ
AHLQPHRQSPAFRHHRLAPPLRDLGLRRCPLHGKPLESYCRTERRCVCWVCALREHRDHQ
VSTVEEEAARRQKLIMERKKELEEHLQITANEIGKWIQNIDCIKESTQRVKGDALAKFSE
LIGAVQVAQREVLGFIERERQAELNRAERVRKELEQRWSELRQEKVRLEALSQIEDSIAI
SQEYLDFNDIAENPASPPLTTGLEAKLGKVERAVSGLSTLIKDHVQTAWTKNLENIGSAD
DEEPILSPSASISHEEPLLPEAQRREDLLQYRCQLTLDPSTVQKELYLSDGNQRVTNIYP
RSEDYEHGPERFDLCSQVLCREPLGGGQFYWEVELNDGDAMIGITHGQIRRKGSDSCCIL
GRNLFSWCVEFWYNNVSAWHNNEETRLQVGRYGRIGVCLNCPAGTLTFYGVTEQLVIIHQ
FHATFNKPMHPAFWVYCDTTLSICQCP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccaccgtgtccctgagccgggacagtctggcctgccccatctgcctggag
ctgctgaacgagccggtgacactgccgtgcggccacagtttctgccggggctgcatcggc
cgtcactgggagatgcagcagagcggcggctgcagctgcccgagctgccggcgtagcttc
gagccgcggccgtggctcggcaccagcacgctgctggcccagatcgtgtgcggtctggct
cagggtgcgccgccgccggccgccgccgggcccggcgatgtgacctgcgactcatgcccc
cgccagcagccgctgaaggccgagcgctcctgtctgcagtgcctggcctcgtactgccag
gcgcacctgcagccgcaccgacagagcccggccttccgccaccaccgcctggcgccgccg
ctccgcgacctggggctgcgccgctgcccgttgcacggcaagccgctggagagctactgc
cgcaccgagcgccgctgcgtgtgctgggtctgtgccctgcgggaacaccgcgaccaccag
gtcagcaccgtggaggaggaggcggcacgcaggcagaagctgatcatggaacggaagaag
gaattagaggaacatttacagatcacagccaatgagattggaaagtggattcaaaacatt
gattgtatcaaggaatccacccagcgggtgaagggcgatgccttggccaagttcagcgag
ctgatcggtgccgtgcaggtggcacagagagaggtgctggggttcattgagcgggagcgg
caggcggagctgaaccgggccgagcgggtcaggaaggagctggagcagaggtggtcggag
ctgaggcaggagaaggtgcggctggaggccctgtcccagattgaagacagcatcgccatc
tcgcaggagtatctggattttaacgacattgcggagaatcctgcctcaccccctttaaca
actggcctggaagctaaacttggcaaggtggagagagctgtctctggactctccactctg
attaaagaccatgtgcaaactgcctggactaagaacctggagaacattggctcagcagat
gatgaagaacctattctgagcccttcggccagcatctcccatgaggagccactgctccct
gaagcacagagacgggaggacctcttgcaatatcgctgccagcttacgttggatcccagc
acggtacagaaggagctgtacctgagtgatggaaaccagcgagtgaccaacatctacccg
aggtcggaggattatgagcacggccccgagagattcgacctgtgctcccaggtgctgtgc
cgggagccgctgggcggcgggcagttttactgggaggtggagctgaacgatggcgacgcc
atgatcggcatcacccacgggcagatccgcaggaaaggctcggacagctgctgcatcctg
ggccgcaacctgttctcttggtgtgtggagttctggtacaacaatgtgtcggcttggcac
aacaacgaggagaccaggctgcaggtgggcagatacggccgcatcggagtgtgcctgaac
tgcccagccggcacgctgaccttctatggagtcacggagcagctggtcatcatccaccag
tttcatgccactttcaacaaacccatgcacccagccttctgggtctactgcgacaccaca
cttagcatctgccagtgcccttag
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