Leucoraja erinacea (little skate): 129704093
Help
Entry
129704093 CDS
T09122
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129704093
Membrane trafficking [BR:
leri04131
]
Protein recycling
Others
Others
129704093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
129704093
NCBI-ProteinID:
XP_055502953
LinkDB
All DBs
Position
15:complement(28757957..29436192)
Genome browser
AA seq
1159 aa
AA seq
DB search
MVALVARGPLWIYSWILLAALASADLTCTPAPARRQGLAYVRLGAEGSAGRWRRGVLDEF
PAQGVPASGEDGDPRQEAVKVTNSRPEEMQLTSTTFALTGDSAHNQAMVHWSGQNSSVIL
ILTKLYDHNLGSVTESSLWRSTDYGTTYEKLNDKVGLKTVLSYLYVCPTNKRKIMLVSDP
EIESSVLISSDEGATYQKYRQSFQIQSMLFHPEEEDWILAYSQDQKLYSSSDFGRRWQLV
HERITPNRFYWSVKNLDMDPDLVHIEARTADGHAEYITCRIQNCSEAASSKLFPGYIDHN
SLVVQDDYVFAQVTSGGRVTYYVSYRREDFAEMKLPKYSLPKDMHIISTDENQVFAAVQE
WNQNDTYNLYVSDARGTYFTVAMENVKSSRGPEGNVMIDLYEVAGIKGMFLANKKVQKQV
KTFITYNKGRDWRLLEAPTTDLRGKDLHCLLPYCSLNLHLNVAQNPYTSGNIGSKDSAPG
IIVASGNVGPELKVDNDNPTGSMFISTDGGNSWRQIFEEEHSILFLDQGGALVAIKHTPQ
PIRHLWLSFDEGRSWRKYSFTSVPLFVDGVLGEPGEETLVMTVFGHLSHRSEWQLVKVDY
RSIFSRKCMENDFQVWTLHTQGEPCIIGETRIYKRRRPATRCILGKKYREAVTYVPCNCT
DKDFECDFGYERHSDGRCLPAFWYNPSFVTKECSMGQSYLNSTGYRKVGANNCTGGVRDQ
YTAQRHPCSSRAPRGLHLITSDGRLATVSGQNVTFIAHLEEGDIPRTRLQIEFGDGTAVI
FANLSSVKGGIKHVYKHGGIYRVIAQVKNNLGSTRAILFLHVNCPIEHVHLTLPYVAITN
QEVNLTAVVLPSTTGPLTYFWWIENKTEPIVTLEDKAPIRFSTEGITSITIQVSDGNSIL
QDVKSIAVFDSYRSLLLSFTPNLEDHNPDIPEWRQDLSKLVKRTLGEVTALPEQQMLLAI
LPGLPTAAELYILPHRDATEEGLNSMSLEQISDMVINALNQNRVQFELKPGVRIIASTAH
LTLAPLVDSGPGHSGSALLMLLSLAFVGLAVFLIYKFKRKIPGINVYAQMQNEKEQEMIS
PITQIEGTPNFTQSELTSPEDQHDTQKLVADASEHHSKTQLPVPLYPVQCPHKCIELTEI
WQAATRALTTTRQSGNTTW
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcactggtcgcccggggtccgctgtggatatactcctggatacttctcgccgcc
ctcgcctcggccgacttgacttgcacccctgctccagcgaggcggcagggactggcgtat
gtgcgccttggggcggaaggttcggcgggccgatggcgccgcggggttttggacgagttc
ccagcgcagggggtccctgcctcgggtgaggacggcgacccccgccaggaggcggtgaaa
gtgaccaactcgcggccggaggagatgcaactgaccagcaccaccttcgcgttaaccggg
gactcggcacacaaccaagccatggtgcattggtctgggcagaacagtagtgtgatactc
atcctgacgaagctctacgatcacaatctggggagtgttacagaaagctcactctggaga
tcgactgactatggaacaacatacgagaagctgaatgacaaagtgggcctcaaaaccgtg
ctgagttacctgtacgtctgcccgacaaacaagaggaagataatgctggtgagcgaccct
gagatcgagagcagcgttctgatcagctcagacgagggcgcgacctatcaaaagtaccgg
cagagctttcaaatccaaagcatgctgttccaccctgaggaggaggattggattctggcc
tacagccaggatcagaagttgtacagttccagtgacttcggacgaaggtggcaactggtc
catgagagaatcactccaaaccgcttctactggtctgtaaagaatttggacatggatcca
gacctcgtgcacattgaagcgaggactgcagatggacatgctgaatatatcacctgtcga
attcagaactgttcagaagcagcaagcagcaagctgttcccaggttatatagaccacaat
tcattggtggttcaagatgactacgtctttgcacaggtgacatctggtggacgggtaacc
tactacgtgtcatatcggagagaggactttgcagagatgaagcttcccaaatattcatta
ccaaaggacatgcacattatcagcacggatgaaaaccaagtgtttgctgccgtgcaggaa
tggaaccagaacgacacgtacaacctctatgtgtcggacgccagaggaacctacttcact
gtcgctatggagaatgtgaagagcagccgaggcccagaagggaacgtgatgatcgacctc
tatgaggtagcagggataaagggaatgttcttggctaacaaaaaggtacagaaacaggtc
aagacattcatcacgtacaataagggaagagattggcgacttctggaggctccgaccaca
gatctgagaggcaaggaccttcactgtcttctgccgtactgctccttaaatctgcacctg
aatgtggcacagaatccgtatacatctggcaacattggcagcaaggattcggcaccgggc
atcatcgtggcttcaggtaacgttggccctgaactaaaagtggacaacgacaaccccacc
ggcagcatgttcatctcaaccgatggaggaaactcctggagacagatatttgaagaggaa
cacagcattttattcctggatcaaggtggtgcattagtggccattaaacacacaccccaa
ccaatccgccatctgtggttgagctttgatgaagggaggtcctggagaaaatatagcttc
acctcggttcctctctttgtcgatggtgtactgggtgagcccggagaggaaactctggtc
atgactgtgtttggtcatctcagccaccgctctgaatggcaattggtcaaagtggattac
aggtctatcttcagtaggaagtgtatggagaacgacttccaggtctggacactccacact
cagggagagccttgcatcataggggagacgcggatatacaagagacgtcgcccggcaacg
cgctgcatcttggggaagaaatacagagaagcggtgacatacgtgccatgcaattgcaca
gacaaggactttgagtgtgattttggatatgagcgtcattctgatggcagatgcttacca
gccttctggtataacccatccttcgtgactaaggaatgtagtatgggacaaagctacctc
aacagtactgggtaccgaaaggttggtgccaataactgcactggtggtgtcagagaccaa
tacacagcccagcggcatccgtgctccagccgagctccccgcggcctgcacctcatcacc
agcgatggacggctggccactgtgtctgggcagaacgtcaccttcattgcccatctagaa
gagggagatattccaaggaccaggctccagattgagtttggtgatggtaccgcagtgatc
ttcgcaaacctcagctctgtcaagggagggatcaagcacgtctacaagcacggcggaatc
taccgtgtcatcgcgcaagtgaagaacaacctggggtccacgcgagcaatcctgttcctg
catgtaaattgtcctatcgaacatgtgcacttgactcttccttacgttgcaatcaccaac
caggaggtgaatttgacagctgtggtgttgcccagtaccactggacctctcacttacttc
tggtggattgaaaacaagactgagcctatcgtcaccctggaggacaaagcccccatcagg
ttctccacagagggaataacaagcatcaccatccaagtatctgatggcaattccattctc
caggacgtaaaaagcatagcagtatttgattcttaccgctcattgttgctgtcgtttaca
ccgaacttggaagatcacaacccagacattcccgaatggaggcaggatctcagcaagctt
gttaaaagaacgctcggagaagttacagcgttaccagagcaacaaatgttgctagcgatc
ctcccaggtttaccaactgcagcggaactgtacatcctcccacaccgagatgctacggag
gaggggttaaacagtatgagtttagagcagatttcagacatggtgattaacgcattgaat
cagaatcgggttcaattcgagctaaagcctggcgttcggatcattgcttccaccgcccat
ctgacattagctcctcttgtggattccggcccaggacacagtggttcagctttgttgatg
ctgttgtctttggcctttgttggcttagctgtttttttaatctacaagtttaaaaggaag
atacctgggattaacgtttatgcccagatgcagaatgagaaggagcaggagatgataagc
ccaattactcaaattgagggcacccccaacttcacccaaagtgaattaaccagccctgaa
gatcaacatgacacacagaaattagtggcagatgcatctgaacatcactcaaaaacacag
ttgccggtgccattatatccagtccaatgtccacacaagtgcattgaactcactgaaatt
tggcaagcagcaacaagagcccttactacaaccaggcagtcaggcaacacaacatggtga
DBGET
integrated database retrieval system
