Leucoraja erinacea (little skate): 129705656
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Entry
129705656 CDS
T09122
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129705656 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129705656 (usp47)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129705656 (usp47)
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129705656 (usp47)
Ubiquitin system [BR:
leri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129705656 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
NLRC4_HD
Motif
Other DBs
NCBI-GeneID:
129705656
NCBI-ProteinID:
XP_055505310
LinkDB
All DBs
Position
18:complement(12415005..12515757)
Genome browser
AA seq
1383 aa
AA seq
DB search
MVPSEENQLLPREGMFWSCRQSIFDEMKKKFSQSETAADEPRVLCIIQDTTNAKVVTQRL
TLNLPASTPLKQLFEDVSAKAGYINATFELVWSNGLNNPDQCPLDYTSEKSLTESGFEPG
KKNFLQLTDKNGEQPQFASDESGTAESSGQEDITQKRIIGPQLRESSVGCGDYSNHSYSY
SPILGKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYRWEFEECEEDRVTNIPYQL
QRLFVLLQTSKKRAVETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPYGSSLAFNSVEEALQAFVQPETL
HGPNQYFCERCKKKCDARKGLKFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPAELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQLSNDFSNDDVVDEGICLDSNSTSDKTS
KAGNEKNGWIYELFSVMVHSGSAAGGHYYACIKSFGDGQWYSFNDQHVSRITQDDIRKTY
GGSPVTRGYYSSAFASSTNAYMLIYRQKESTKNAKFLEVHDFPKHIQHLVQKEKESEEQE
KRQKEIERNTCKIKIFCIHPMRQTMMENKLEVHKDKTLREAVEIAYKLMELEGVLPLDCC
RLVKYDEFHDYLERSYEGEEETPVGMLLGGVKSSYMFDLLLETRRPEQNFQPYKSGEVMV
KVHVVDLKTETLAPPVNVRAYLNQTVAEFKQIISQATGLSAEHMRIVLERCCNDLRLLHV
PSKTLKAEGFFRSNKIFVESLDTQDNQAPFTESQLWHLLDQHANTIRLYVSLPEQSPVSQ
GLHQKAAGDPVNLEGSCESAGTSSACRKPVEAILEESTERLKNLSLLQHQQQLSCTLGGN
GDGMKSAEGSDFETIESPSQETELSASVDNRELENRIPSSDAEVPLQSEEKSDSDVNNDR
STSSVDSDILSSSHSSDTLCNADTAPISLSNGLDSHSITYSRRSKASEGKKETWDTAEED
SGTDSEYDENGKCRGLARYIYFRAEHCTSEDGSGDGQKNLLVLVDKRITLAAFKQQLEPY
IGVPSSQFKIFRVYANSQEFESVRLNETLSSFSDDNKITIRLGRALRKGEYRVKVFQLLV
NDPEPCKFLLDAVFAKGMTVRQSKEELLPQLREQCGLDLSIDRFRLRKKTWKNPGTIFLD
YHVYENDINISSNWEVFLEALNEAEKMKSLSQLAVLTRRWKPSQMKLDPFQEVVLESSSV
EELKEKLHAISEIPMENIEFAKGRGTFPCDISVLEVHQDLDWNPKVTTLNVWPLYICDDG
AVIFYRDKTEQLMDLTEEQRSGLLKKESSRLQKLGHRVNYSPRKEKALKIYLDSGPSKDS
SQD
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagtgaagagaaccagctgctaccccgggaggggatgttttggagttgcaga
caaagtatctttgatgaaatgaagaagaaattctctcagtcagagacggcagcggatgaa
ccacgggtgctgtgtatcatacaggacaccactaatgccaaggtggtcactcagcggctc
actcttaaccttcctgcatcaactccactcaaacagctgttcgaggacgtctcggctaaa
gcaggctacatcaatgccaccttcgagttagtctggagcaatggtctgaacaaccctgac
cagtgccccctggattacaccagtgaaaaatctctcactgaatctggatttgaaccagga
aagaaaaacttccttcaacttacagataaaaatggagagcagccccaatttgcatcggat
gaatctggtacagcagaaagcagtggacaggaggacatcacgcagaagaggatcattggc
cctcagctgagggaaagctctgtgggctgtggagattacagtaatcacagctactcgtac
tctcccatcctggggaagtcagaaaccggatatgtgggattggtaaatcaagccatgacc
tgctatctgaacagcttgctgcagacgctctttatgactccagaatttaggaatgcacta
tacaggtgggagtttgaagaatgtgaggaagatcgggtgaccaacattccataccaactc
caaagactctttgttttgttgcaaacgagtaaaaaaagagcagtggaaacaacagatgtg
acccggagctttggttgggatagcagtgaagcctggcagcagcatgacgttcaagaactg
tgcagagttatgtttgatgcactcgagcaaaaatggaagcaaacggaacaggctgacctc
attaaccagctgtaccaaggaaaattgaaggattacgtcaggtgtcttgagtgtggctac
gagagctggagaatcgatacgtacctcgatatcccactggtgatcagaccttatggttcc
agcctggcgtttaacagtgtggaagaagctttgcaagcatttgtccagcctgagactctg
catggacccaaccaatatttctgtgaacgctgcaagaaaaaatgtgatgcacgcaaggga
ctgaagttcctgcatttcccatacttactgacactgcaacttaagcggtttgattttgac
tacaccaccatgcaccgaataaagctgaatgatcggatgacgtttcctgccgagctggac
atgagtcctttcatagatgtggaagatgaaaaatctcctcagaccgagagctgcacggac
agtggtgctgaaaatgaagggagctgtcacagtgaccagttgagcaatgacttctcaaac
gatgatgttgtggatgaagggatctgcctggacagcaacagtaccagtgataagacatca
aaggcagggaacgaaaagaatggttggatctacgaactcttctcggtaatggttcattca
gggagcgctgctggtggacattactacgcctgtataaaatctttcggtgacggacagtgg
tatagtttcaatgatcaacatgtgagcaggattactcaagatgatattcggaaaacctac
ggcggctctccagtgaccagaggctattactccagcgcctttgctagctcaaccaacgcg
tacatgttaatttacagacaaaaggagtcgacgaagaatgcaaagttcttggaggtgcat
gattttccaaagcatattcaacacctggtccaaaaggagaaggaatcagaagagcaagaa
aaaagacagaaagaaattgaacgcaatacatgcaagatcaagattttctgcattcacccc
atgagacagacaatgatggagaacaaactggaggtccacaaggacaaaacgttacgggaa
gctgtggagatagcgtacaagctgatggaactagaaggtgtgcttccgctcgactgctgc
cggctggtcaagtacgacgagtttcacgattacctggagcgttcatacgagggagaagag
gagacccctgtggggatgctgctgggtggagtcaagtcatcgtacatgtttgacttgctg
ctggagacgaggcggccggagcagaactttcaaccgtacaagtcgggagaagtgatggtg
aaggtgcacgtggttgacctgaagacagaaaccctggctccacccgtcaatgttcgggcc
tacctcaaccaaactgtggccgagttcaaacagatcatttcccaggcaacaggactctct
gctgaacacatgcgcatcgtactggagcgctgttgcaatgatctgcggctgctccatgtg
cccagcaaaacgctgaaggctgaaggattcttcaggagtaacaagatatttgttgaaagc
ttggacacgcaggataatcaggcaccgttcaccgaatcacagctctggcatctactggac
cagcatgccaacaccattcggctttacgtgtcgttgccagaacaatcaccagtgtcccaa
gggctgcatcaaaaagctgccggagacccagtcaatctagaaggcagctgtgagtctgca
ggaacatcttctgcttgcaggaaacccgtggaagccattttggaggagagcaccgagaga
ctgaagaacctttcactgttgcagcaccagcaacagttgtcctgcactttgggagggaat
ggtgatgggatgaaaagtgctgaaggcagtgactttgagaccatcgaatccccgtcgcaa
gagactgaattgtcggcctctgtggacaacagggaattggaaaaccggattccctcctcc
gatgccgaggtcccgctgcagtctgaggagaagtccgattcggacgtaaacaacgacagg
agcactagctccgtggatagcgatatcctcagctccagccacagcagcgacactttgtgc
aacgcagacacggcccccatttccctgagcaatggcctggactctcacagcatcacatac
agccgccgctcgaaggctagcgaagggaagaaggagacctgggacacggcggaggaggac
tcgggaacagacagcgagtacgacgagaatgggaagtgccgaggattagcgcggtacatt
tacttcagagcagagcactgcacatctgaagatggatcaggtgatggacagaaaaatttg
ttggtgcttgttgacaagcgtatcacgctggctgcattcaagcaacagttagaaccgtac
attggagttccatcatcccagtttaagatattccgagtctatgctaatagccaggagttt
gaaagtgtccgattaaatgaaacactttcgtcattctctgatgacaacaagataaccatt
cgacttggacgagctctacggaaaggagaatatcgtgttaaagtcttccaactcctggtg
aatgatccagagccttgtaaatttctcctcgatgctgtgtttgctaaaggcatgacagtg
cgtcagtcaaaggaggagctgctgccccagctgagagagcaatgtgggctggatctcagc
atagacaggtttagactgaggaagaaaacctggaagaatcctggaacaatctttctggac
tatcacgtctatgagaacgacatcaacatctccagcaactgggaagttttccttgaagca
cttaatgaagctgagaagatgaaatccctgtcccagctggcagtactgaccagacgatgg
aagccgtcgcagatgaagctcgaccctttccaagaggttgtcctggaaagcagcagtgtt
gaggagctgaaggagaagttacacgcaataagtgagattcccatggaaaatatagaattt
gccaagggcaggggaacatttccctgtgacatttcagtgctggaggttcaccaggatttg
gactggaatcccaaagtgacgaccctgaatgtctggccactttacatctgtgacgacgga
gcagtcatcttctacagggacaagacggagcagctgatggacctgacggaagagcaacgc
agcgggctactgaagaaagagagcagccgcctgcagaagttgggccaccgggtcaactac
tctccccgcaaggagaaagcactgaagatctatttggacagcggccccagtaaagactcc
agccaggactga
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integrated database retrieval system
