Leucoraja erinacea (little skate): 129707922
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Entry
129707922 CDS
T09122
Symbol
plxna4
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-A4
KO
K06820
plexin A
Organism
leri
Leucoraja erinacea (little skate)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
PSI
TIG_plexin
Sema
DUF948
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
129707922
NCBI-ProteinID:
XP_055509364
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All DBs
Position
22:30303142..30788966
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AA seq
1888 aa
AA seq
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MAACRGARRYSIFLLLLSVASGRREATNLEYKSFEGENADWAFNHLSLDERTGSVYLGAV
NRIYKLSSDLQLLVVHQTGPDEDNPDCYPPRIVQPCSEPLSLTDNVNKMLLIDQGERRLI
ACGSLYQGICKVLRLNDLFKLGEPFHKKEHYLSGVNDSGSVFGVIVAGQGHSSKLFVATA
VDGKPEYFPTISSRLLAANPEADEMFSYVFHDEFVASLIKIPSDTFTVIPDFDIYYIYGF
SSSAFVYFLTLQPEVVHAGPGSTRQRVYTSKLVRLCQADTTFNSYVEIPIGCVKDGVEYR
LLQAAHLAKAGPVLAKSLGIIPGHDDVLFAVFSKGQKQRSQPPDETVLCMFVLNTINERI
KRRLQSCYRGEGLLDLAWLKVKDIQCVPAPVPIDDNFCGLDINAPLGGSTLMQGIPLFSE
EKDRMSSVISYIYNNHSLVFVGTKSGKLKKIRVDVASHGGRQYETIQAVQSGAILRDMAL
SVDHQYLYIMSQKQLTRVPVEACGQYKTCTDCLGSGDPHCGWCVLHNTCTRKDMCKRSTE
LRRFTSDIRQCVRLSVRPSNISVSQYNVVLVLEAHNVPELTAGVNCSFEDFAEMDGLVMG
NIIKCISPAKREVPRIQTDEGDHQVVQLQLKSKETGMTFASTSFVFYNCSVHHSCLSCVT
SPYRCHWCKYRHVCTHDPRSCSFQEGRVNVSEDCPQLLAAEKILMPVGVVRPITLKSRNL
PQPQSGQRGYECILNIQGVEQRVPALRFNSTSVQCQNTSYAYDETAINNLPVSLSVVWNG
NFSIDNPAHIQVHLYKCGVLRESCGLCLKADPNFECGWCKGDGRCTLRQDCTVSGDNWLQ
PTRTNSKCTNPRITKIVPVRGPREGGTRVTIYGENLGLNFWEIENYVRVAGVDCIPLEEG
YIPAEQIECEMDVARHGQYAGFVEVCVEECKQEFMAKSTQRYSFVLSTLTDLTPIKGPVS
GGTMVTIRGRNLDAGSNISVLFGQQPCVFHRRIAWAIVCNSTSAPQGAGNISVTVGVDKA
RIEKELQFEYMEDPTIVKIEPEWSIVSGSTPMLVWGTNLDIIQNPKIRAKLNGVETINEC
KVYNASTMVCQAPSLAISQSQQTDNTERPDEFGFILDNVKTLLIYNNTNLIYYPNPVFEP
LSTTGVLELKPGSPIILKGRNLIPSVAAGNTKLNYTVFIGDKPCTVTVSDTQLLCESPNL
TGRHRVLVRVGGLEHSPGTVHIFPDSPLSFPAIISIGAAGGLLIIFIIVVLIAYKRKSRE
SDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTSDLDGTGIPFLEYRAYTMRVLF
PGIEDHPVLRELEVPGYRQERVEKGLMMFGQLINSKVFLLTFIRTLESQRSFSMRDRGNV
ASLIMTVLQTKLEYATDVLKQLLSDLIDKNLESKNHPKLLLRRTESVAEKMLTNWFTFLL
YKFLKECAGEPLYMLFCAIKQQMEKGPIDSITGEARYSLSEDKLIRQQIDYKTLVLNCVN
PDNENSPEISTKTLNCDTITQVKEKILDAIFKNLPCSHRPKAADMDLEWRQGRMTRVILQ
DEDVTTKIENDWKRLNTLVHYQVTDGSVVALVPKQTTAYNAVNNSTVSRTSASKYETMIR
YTGSPDSLRSRTPMITPDLETGVKVWHLVKNHEHGDQKEGDRGSKMVSEIYLTRLLATKG
TLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHQIHDPHVRHTWKSNCLPLR
FWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPN
YKSWVERYYADIGKMPAISDQDMNAYLAEQSRMHMAEFNAMSALSEIYSYVSKYSEEIVS
TLECDEQSRRQRLAYKLEQIVALMSIES
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtgcagaggggcgagaaggtactccatcttcctcttgctgttgtcggtggcg
tccgggcggcgggaagccacgaatctggagtataaatccttcgaaggggagaacgcggac
tgggcgttcaaccacttgtcgttggacgagcgcactggcagcgtgtacttgggggcggtg
aacaggatctacaaactgtccagcgacttgcagctgctggtggtgcatcagacggggccg
gacgaggacaacccggactgttaccctccccgcattgtgcagccgtgcagcgagccgctc
agcctgaccgacaacgtgaacaagatgctgctgatagaccaaggcgagaggcggctgatc
gcctgcggcagcctgtaccagggcatctgcaaagtgctgagactcaacgacctcttcaag
ctgggcgagcccttccacaagaaggagcactacctgtccggggtgaacgacagcggctcg
gtctttggggtgatcgtggcgggccagggtcacagctccaagctgtttgtggccacggcg
gtggacggcaagcccgagtacttccccaccatctccagccgccttctcgctgccaacccc
gaggcggacgagatgttctcctacgtgttccacgacgagttcgtggcgtcgctcatcaag
atcccctccgacaccttcacggtcatccccgactttgacatctactacatctacggcttc
agcagctcggctttcgtctacttcctcaccctccaacccgaggtggtccacgccggcccc
ggctccacccgccagagggtctacacctccaagctggtgcgcctgtgccaagccgacacc
accttcaactcctacgtggagatccccatcggctgcgtgaaggacggggtggagtaccgg
ctgctgcaggctgcccacctagccaaggccggcccggtgctggccaagtccctgggcatc
atccccggccacgacgacgtgctcttcgccgtcttctccaagggccagaagcagcgcagc
caacctcccgacgagacagtcctgtgcatgtttgtgctcaacaccatcaacgagcgcatc
aagaggcgcctgcagtcctgctaccggggcgagggcttgctggacctggcctggctcaaa
gtcaaggacatccagtgtgtgcccgcgcctgttccaatcgacgacaatttttgtggcttg
gacattaatgccccattaggcggttccaccctcatgcagggcattcccctgttctcagag
gagaaagacaggatgagctcggtgatttcgtacatttacaacaaccattcgctggtgttt
gtgggcacgaaaagtggcaagctgaaaaagattcgagtagacgtggcctctcacggcggc
aggcagtacgagaccattcaagccgtgcagagcggtgccatcctgcgtgacatggctttg
tccgttgaccaccagtacctctacatcatgtcacagaagcagctgaccagggtccccgtg
gaagcgtgtgggcagtacaagacgtgcacggattgcttgggatcgggagaccctcactgc
ggctggtgtgtgctccacaacacgtgcacgaggaaagatatgtgcaagcgctccaccgag
ctccgaaggttcacctccgacatcaggcagtgcgtccgcctcagcgtgaggcccagcaac
atctccgtctctcagtataacgtggtgctggtgctggaggcacacaacgtgcctgagctc
accgcgggggtcaactgctcgtttgaggactttgcagagatggacggcctggtgatgggg
aatatcatcaagtgcatctcgccggccaagagagaggtgcctcggatccaaacggacgaa
ggagaccaccaagtggtccaactccagctgaagtccaaggagaccggcatgaccttcgcc
agcaccagctttgtcttctacaactgcagcgtccatcactcgtgcctgtcatgtgtgacc
agtccctatcgatgtcactggtgtaaatatcgacacgtgtgcacacatgacccacggtcg
tgctctttccaggagggccgggtcaacgtctcggaggactgtccccagctgctggctgct
gagaagatactgatgccagtgggagtggtgaggcccatcactctgaagtccaggaacctt
ccgcagccccagtctggccagcgtggctatgagtgcatcctaaacatccagggagttgag
cagcgagtgccagccttacgcttcaacagtaccagtgtccagtgtcagaatacttcatac
gcgtacgatgaaactgcgatcaacaacctcccggtgagcctctccgtggtctggaacggc
aacttcagcatcgacaacccagcgcacatccaagtgcacctgtacaagtgcggagtgttg
cgtgagagctgcgggctgtgcctgaaggctgaccccaactttgagtgcggctggtgcaag
ggggacgggcggtgcaccctccgccaagactgcaccgtctccggggacaactggctgcag
ccgacacgtaccaacagcaagtgtaccaaccctcgcatcaccaagatcgtaccagtacgt
gggcccagggaaggcggaactagagttacgatctacggggaaaatctcggcctgaatttt
tgggagattgaaaactacgtccgtgtggctggagtcgattgtatccctttggaagaagga
tacattccagcggaacagatcgagtgcgagatggacgtcgcccggcatggccagtacgct
ggcttcgtggaggtgtgcgtggaagaatgcaagcaggagttcatggcaaagtcaacgcag
cgctacagctttgtgctctcaactctcacggatttgacgcccatcaagggtccggtgtcg
ggggggacgatggtcaccatcagaggcaggaacctggatgccgggagcaacatctcagtc
ctgtttggccagcaaccttgtgtgttccacaggcggattgcctgggcgatagtctgcaac
tccacgtctgcgccgcagggcgcggggaacatcagcgtcaccgtgggggtggacaaggca
aggatcgagaaggagctgcagtttgaatacatggaggatcccaccatcgttaagattgaa
ccagaatggagtatcgtcagcgggagcacaccgatgttggtctggggcaccaacctggac
attatccagaatccgaaaatccgggccaagctgaatggagtggagacaatcaacgagtgt
aaggtgtacaacgcatcaacgatggtgtgccaggccccatccctggccatcagtcagagt
cagcagaccgacaacacagagcgtcccgacgagtttggattcatcctggacaacgtgaag
acattattgatctacaacaacaccaacctcatctactaccccaaccctgtgtttgaacct
ctcagcaccacgggcgttttggaattgaagcctggctctcccattatactgaagggccga
aacctcatcccttccgtggctgccggtaacaccaagctgaattacaccgtgttcatcggg
gataaaccgtgcactgtgaccgtgtcggacacacagctcctctgcgagtctccaaacctc
accgggcggcacagagtactggtgcgggtgggcggcctggagcactcgcccgggaccgta
cacattttccccgacagcccgctcagcttcccggccatcatcagcatcggagcggccggt
ggtctcctcatcatcttcatcatcgtggtcctcatcgcctacaagaggaagtcccgggag
agcgacctgacgctgaagaggctgcagatgcagatggacaacctggagtcacgggtggcc
ctggagtgcaaagaagcctttgcagagctgcagacagacatcaacgagctgaccagtgac
ttggacggaactgggattcccttcctggagtatcgggcttacaccatgcgggttctcttc
ccggggattgaagaccatcccgttctccgggagcttgaggttccgggataccgtcaggaa
agagtggagaaaggtctgatgatgtttggtcagctcatcaacagcaaggtcttcctgctg
accttcatccggacactggagtcccagcggagcttctccatgcgggaccgggggaacgtt
gcgtcactcattatgaccgtgctgcagaccaagctggagtatgccaccgacgtcctgaag
cagctgctctctgacctcatcgacaagaacctggagagcaagaaccaccccaagctcctg
ttgaggagaactgaatctgtggcagaaaagatgctgaccaactggtttacattcctcttg
tacaaattccttaaggagtgtgcaggggagccattgtacatgcttttctgcgccatcaag
cagcagatggagaaggggcccatcgactccattacaggcgaggcccgctactctctgagc
gaggacaaactcatcaggcagcagatagactacaagacgctggttctgaattgtgtgaat
ccagacaacgagaacagtcctgagatttccacaaagacgctaaactgtgacacgatcacc
caggtcaaggaaaagatcttagacgccatcttcaagaacttaccttgctcccatcgacca
aaggccgctgatatggacttggaatggcgacagggaagaatgaccagggtgattcttcag
gacgaagatgtcaccaccaagatagagaatgactggaagaggctgaacacactggtgcat
tatcaggtgacagatggctcagtggttgccctggttcccaagcaaacgacggcttacaat
gcggtgaataactccactgtctcccgaacctcagccagcaaatacgaaaccatgatcagg
tacacgggcagcccggacagcctgcgttcccgcacgcccatgatcacccctgacctggaa
accggggtgaaggtctggcatctggtcaagaaccatgaacacggagaccagaaggaagga
gaccggggcagcaagatggtgtccgagatctatctgacccgacttctggctacaaagggg
acgctgcagaagtttgtggatgacctgtttgagacgatcttcagcacagcccaccgtggg
agcgcgctgcccctggccatcaagtacatgtttgacttcctggacgagcaagcagacaag
caccagatccatgacccacatgtgcgccacacctggaagagcaactgcctcccattgagg
ttttgggtgaacgtgatcaagaacccgcagtttgtcttcgacatccacaagagcagcatc
acggatgcctgcctctccgtggtggcacagaccttcatggattcctgttccacttcggag
cacagactgggcaaggactctccgtccaacaagctgctctacgccaaggacatccccaac
tacaagagctgggtggagaggtactatgcagacattgggaaaatgccggccatcagtgac
caggacatgaatgcctaccttgcggaacagtcccggatgcacatggctgaattcaacgcc
atgagtgccctcagcgaaatctattcctatgttagcaaatacagcgaggagatcgtaagt
actctagaatgtgacgagcagtccaggaggcagcggttagcttacaaacttgaacagata
gttgctctcatgtcaatagagagctga
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integrated database retrieval system