Leucoraja erinacea (little skate): 129709333
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Entry
129709333 CDS
T09122
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129709333
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129709333
04147 Exosome [BR:
leri04147
]
129709333
04090 CD molecules [BR:
leri04090
]
129709333
Enzymes [BR:
leri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
129709333
Transporters [BR:
leri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
129709333
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129709333
CD molecules [BR:
leri04090
]
Proteins
129709333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
AAA_5
AAA_30
DUF87
G-alpha
AAA_28
AAA_7
AAA_29
APS_kinase
nSTAND3
DUF815
AAA_21
SbcC_Walker_B
Mg_chelatase
AAA_24
DUF2207_C
Ap4A_phos_N
Motif
Other DBs
NCBI-GeneID:
129709333
NCBI-ProteinID:
XP_055511591
LinkDB
All DBs
Position
2:41331448..41493882
Genome browser
AA seq
1274 aa
AA seq
DB search
MAEKYTKGNTDEINKSKDVPSDKAQNEESKTKDEKGKKIEQVGPLSLFRYADCGDKLLMV
LGSFAAIIHGTALPLMIIVFGELTDSFVHHGLMKNIPANSTLNVTGDFTETLEEQMTRFS
FYYSGLGGGAFITAFMQICFWSLAAARQTMKIRIELFHAVLRQEIGWFDVSEVGEINTRL
TDDISKIHDGIGDKIGILIQSLSSFVAGLVVGFIKGWKLALVILAMSPVMGICTAIWAKI
LTSFTKQEQTAYAKAGAVAEEALSSIRTVVAFGGQKKEVDRYLKKLIEGHKLGIKKAISS
NIAIGFNYLIMFGCYALAFWYGSILVLDEDYTIGTVLTVFFAVIIGAISIGQTSPHIEAF
ASARGAAHVIYHIMDQEPLIDSFSESGHRLSQIKGDVEFSNVHFKYPSRPDVKILKGLNL
KLQSGQTVALVGNSGCGKSTTIQLLQRLYDPEDGMIMLDGHDIRSLNVRHLREFIGVVSQ
EPILFATTITDNIRYGCEDVSMTDIEEATKEANAYEFIMKLPDKFNTLVGERGTQLSGGQ
KQRIAIARALVRNPKILLLDEATSALDAESEAAVQVALDKVRQGRTTIVIAHRLSTVQNA
DVIAGLEDGVIAELGTHEQLMETKGIYYNLVTTQTFKRENEDQERNDDKTEEKSTKRILP
GLSTQGSVKKAEIAEEKTDASEDAQDEDLPNVSFFRVLKMNKREWPYLLMGTFCAVINGI
LQPAFAIIFSGIIGVFAQPDKNVVRREATLYSLFFLAIGGISFVTFFIQGFTFGKSGETL
TLRIRSMAFKAMMRQDISWYDDSKNSTGALTTRLANDASQVKGATGARLATVAQNVANLG
CAIIISFIYGWQLTLLVLAIVPIVAISGVIQMRMVTGHATKDREELENAGKIATEAVENI
RTVVALTREKKFEQMYKSSMAVPYRNAKNKSCIYGVTFGLSQAVMAFAYAACFRFGAWLV
THNYMGFQDIFLVFSAIVFGAMALGQASSFAPDYAKAKVSAARIIMLIEQTVSIDSFSDA
GDVPSTFEGMVNFEDVAFNYPTRPDVPVLQGLTVAVAKGQTLALVGSSGCGKSTTVQLLE
RYYDPQNGKVFLDNNNIKDLNIQWARAQIGIVSQEPVLFNCSIAENVAYGDNSRIVSQEE
IEAAAKAANIHSFIETLPQKYETSVGDKGTQLSGGQKQRVAIARALVRNPKILLLDEATS
ALDAESEMIVQEALDKAREGRTCIVIAHRLSTVQNANKIAVFHNGQIAEEGTHQQLLAKQ
ALYYNLVNAQMGRN
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagtatacaaaaggaaacactgacgaaataaacaaaagtaaagatgtccct
tctgataaagcacagaatgaagagagcaaaactaaggatgagaaaggaaaaaagattgaa
caggtcggcccactgtcattgtttcgctatgcagattgtggtgataaattgttgatggtg
ctgggtagttttgctgccataattcatggaactgccctgccactcatgatcatagtgttt
ggagagttgacagacagctttgttcatcatggacttatgaaaaatataccagcaaattca
acgctgaatgtaactggtgattttaccgaaacattggaggagcaaatgacgagattttcc
ttttactattcagggttagggggaggtgcttttattacagcctttatgcagatttgcttc
tggtcactggcagcagcaaggcagacaatgaagataagaattgaattatttcatgctgtg
ttgcgtcaagaaattggatggtttgatgtcagtgaggttggtgagatcaacacccgtcta
actgatgatatttcgaaaatacatgatggtattggtgataaaataggcattctcatacag
tcactgtcctcctttgtagctgggttagtggttggctttataaaaggatggaagttggca
ttggtgattctggctatgagccccgttatgggaatctgtactgcaatctgggctaagata
ctgacctcgttcacaaaacaagagcaaactgcctatgcaaaggctggagctgtggcagag
gaggcattgtcatccatcagaactgtggtagcttttggaggacaaaagaaagaagttgac
aggtacctaaaaaaattaattgaaggccacaagcttggaatcaaaaaggccatcagcagc
aatatagcaataggtttcaactacttaataatgtttggctgctatgctttggccttctgg
tatggaagtatccttgttttggacgaggactatacaattggaacagtgcttacagtattc
ttcgcagtcataattggtgcaatttccattggtcaaacatcaccgcacattgaagcattt
gccagtgcaagaggggcagcgcatgtgatctatcacatcatggaccaggaaccattaatt
gacagtttttcggaaagtggacacagactcagtcaaattaaaggagatgtagaattttca
aacgtgcatttcaaatatccatcacgacctgatgttaagatattgaagggtctgaacttg
aagttacaaagtggccaaacagttgcactggttggcaacagtggctgtggaaagagcacc
accattcagcttctgcagagattatacgatcctgaagatggaatgataatgctcgatgga
catgatattcggtccttgaatgttaggcatctcagagaatttattggagttgtgagccag
gagcccatcctctttgccaccacaataactgacaacattcgctatggctgtgaagatgtc
agcatgactgacattgaagaggctaccaaggaagctaatgcatatgaattcattatgaaa
ttgccagataaattcaatacattagttggagaaagaggcactcagctcagcggaggccag
aagcaaagaattgccattgcgcgtgcacttgttcgcaatcccaaaatcctgctgctggat
gaagcgacgtctgcattagatgctgagagtgaagctgcagtccaggttgcacttgacaag
gtacgacaaggccgcaccacaatagtaattgctcatcgcctgtcaactgttcaaaatgca
gacgtcattgcaggattggaagatggcgtaattgcagagctgggaacccatgaacaactg
atggaaacaaaggggatctattacaacttggtcaccacacagacttttaagcgtgaaaat
gaagatcaagagagaaatgatgataaaacagaagaaaaaagcaccaaaaggatactgcct
ggactgtccacgcaaggtagtgtaaaaaaggcagaaatagccgaggagaagacagatgca
agtgaggatgcacaggatgaggatctacccaacgtgtccttttttagggtcctcaagatg
aacaaaagggaatggccttatctattaatgggaactttctgtgccgttataaatgggatc
ttgcagcctgcctttgccataattttttcagggattatcggggtttttgcgcaaccagac
aagaatgttgtacgtcgtgaggctacgttgtattccctatttttcttagcaataggaggt
atctcctttgttactttttttattcagggattcacatttggtaagtctggtgagacactg
actctgaggatacgatccatggcatttaaggcgatgatgcgacaggatattagctggtat
gatgattcgaaaaacagtaccggagcgttaacaaccagacttgcgaatgatgcatctcaa
gttaagggggctactggtgccagacttgctacggttgcacagaatgtagctaatcttgga
tgtgccattattatttccttcatctatggctggcaactgactctgttggtcttagccatt
gtgccaatcgtggcaatttcaggagtgatacagatgcgaatggtcactggtcatgccacc
aaggatcgggaggaactggaaaatgctggaaaaattgctacagaggcagttgaaaacatt
cgaactgttgtagctctaacaagagagaaaaaatttgaacaaatgtacaaaagtagcatg
gctgttccatacaggaacgccaaaaataaatcttgcatttatggagtcacctttggcctt
tcacaagcagttatggcctttgcttatgcagcatgttttcgatttggagcctggctagtg
acacataactacatggggttccaagacatttttctcgtgttctcagcgattgtatttgga
gcaatggctttgggacaagccagctcgtttgcacctgattatgccaaggctaaagtatca
gcagcccgaatcatcatgttgattgaacaaacagtatcaatagacagctttagtgatgct
ggtgatgttcccagcacatttgaaggaatggtcaactttgaagatgttgcctttaactat
cccactcgcccggatgtgcctgtgttacaaggtttaacagtcgcagttgcaaaaggacaa
accttggctctagtgggaagtagtggctgtgggaaaagcaccaccgtgcagctgctggag
aggtactatgacccacaaaatggaaaagtgtttttagataacaacaatataaaggatctc
aatattcagtgggctcgggcacagattggtattgtgtctcaagaaccagtgctgtttaac
tgcagcattgctgagaatgttgcctatggggacaacagcaggatcgtatcccaggaagaa
atagaggctgcagccaaagctgctaacatacattcttttattgaaactctccctcagaaa
tatgaaacgagtgtcggagacaagggcacccagctctctggtgggcagaaacagcgtgtg
gccattgcccgagcattagtccgaaatcctaagatcctgctcctagatgaagctacatca
gcactggatgcagaaagtgaaatgattgttcaagaagcactggacaaagcaagagagggc
cgtacctgcattgtgatagctcatcgtttgtctactgtccaaaatgccaacaaaatagct
gtgtttcataatggacaaattgcagaggaaggaacacaccagcaacttttggccaaacaa
gctctttattacaatctagttaatgcacaaatgggacgaaactga
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integrated database retrieval system
