Leucoraja erinacea (little skate): 129710739
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Entry
129710739 CDS
T09122
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129710739 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129710739 (pom121)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129710739 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
DUF3292
Motif
Other DBs
NCBI-GeneID:
129710739
NCBI-ProteinID:
XP_055513919
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All DBs
Position
28:complement(18641721..18685381)
Genome browser
AA seq
1279 aa
AA seq
DB search
MSPAHKRSLITWVAGLSFALLLSFYILGWYLLGLLAVASVWVYYYYYSPPGVVGLRPGPQ
FHPSRIKALILGTRWIEVVHNKLNGGSSQWKGRGRSARGRPQHPGKTSGNSWKWEVNCEE
YKPLMTANERSPADLMMGSYLSTENPAQTTFCSQEVKRRYNRPSALPSPTRRLSFGEHQA
MVNKFTVTPRRRYPIHQPQYSVPGTLPTVRWDGYQKKNILSSRNSIMVHSPVTVKIARPD
ASIIHSPLLDHMMSPAVSPLIDPCSKTTVLNALKESRKRMVEDDPERSLISEHENKRRRH
DSSGSGHSAFEPLLANGAPASLVPKPGTLKRGTNSQCSDDPISKRSRTSSISSLNSICVG
GKQSSVRNPIFSSYSSTRGQIQGLRNYLSARNTTPLPSPASSRSETPERSGKKIREEEIQ
RSNSSTPVRVDRTEKDQAIEEETVTPLSKLSPSTVDSSPMEGDGKRKRKIPLLTKRKGDQ
LTLHPPLELGYTITADDMDSEKKARLDRIKKVLQEKDEPSKSLEPLMIAPSVPLFTTPIV
ESSAGSTPISTSISAIVSNPLLDSLKMMQEHTSFTATSDSVNGMNPSKMDKAPDVSKKAF
MGELLLPPTPTTAAMTITTDIPGFKPVDALKFSCPTITQSLLTSINKPAPKAITTTTNSC
QVSSVVSAQESKLNKGPEMSASVCTGNSSTPSTSFNLSGTMTVIPTGISTTASSSVSIPE
FKPVFGLPVTQQTTIASTTLSSIMSITTPISLAAPVTSNSAASIIPFKPVFGNSVTPTTA
TTTSAPFNFGQSVQAKVNNEAPPPTTTKSNSTLFQFGASSALTSTNIETEVKSSNVAISF
GLNETLSAKQNMAPTASNNLSSQQQFQFGSNPSTTTTTTATTAASGPVFQFGKTSIDATA
TSAGPSVPVFGQPNVVTSQASTSIAATSNLFGNFTAAVSAPSTTSSVQLTHTFGNSGKTS
LFSNATSTPPFGGMTAQLNFGGTSSPSLFGANAAATQQTPTKPPAFGNIVTPFNFGATPV
KPTFQNTTSQSAFGTPSQPVFGGVTAQSGFGPTSTQPTFGSTSGGFPFGTTTSSTATPMF
TATKSSGTGATGSIFGSAQGVGFGSTNQPAITTSGFSVAASNPNIASAGFFVSGQSAFCA
STPSIPFATSTPTASSSSQNMFGSSLTNQGTQNQSTSQFNFGAANTVENKSTFGGFNFGT
PSLNFGTGTTAPGFGQSTPTANFSFGTTNTPASNFGSPGTGTAAASAFAATPAFSIGAGS
RSTGGRQRLQARRQHIRKR
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcacacaagcggtctttgataacgtgggtggcggggttgagcttcgcttta
ttgctttccttctacatcttgggttggtacttgctgggcctgctggccgtggcatccgtt
tgggtttattattattattattctccgccaggcgtagtgggcctcaggcccgggccgcaa
tttcatccaagtcgcatcaaggcgttgattctcgggacgcgttggatcgaggtggtgcac
aacaaattaaacggtgggagcagtcagtggaaggggagaggtcggagtgccagaggcagg
ccgcagcatccaggcaagacgtcgggtaacagctggaagtgggaggtgaactgcgaggag
tacaaaccgctgatgacagcgaacgagcggagtccggccgacctcatgatgggcagctat
ctgtcgaccgaaaacccggcgcagaccacgttctgcagtcaggaagtgaaaagacgctac
aatcggccgagtgccctcccatccccaaccaggagattgtctttcggggaacatcaagct
atggtaaacaaattcacagtgacccctcgccgtcggtatcctatccatcagccccagtat
tcagtacctggaacccttccaacagttcgatgggatggctaccagaagaaaaatattctg
tcctccagaaactctattatggtacatagtccagtgactgttaaaattgcacgacctgac
gcaagtataattcattcaccactattagaccatatgatgtcccctgctgtgtctcctttg
attgacccctgctcaaaaacaactgtgcttaatgcattgaaagaaagtcggaagagaatg
gtggaagatgatcctgaaagatctttgatctctgaacatgagaataagcgcaggcgtcac
gacagtagtggaagtggtcattcggcatttgaacccttgttggccaatggagctccagct
tcattagttccaaaacctggaacgctaaagagaggcaccaattcccagtgttcagatgac
cccatctccaagagatcacgaacatcctccattagttcattgaacagcatttgtgtgggt
ggaaaacagagttctgttcgcaatcccattttcagttcttacagttccacccggggacaa
atccagggcttgaggaactatctctctgcacgaaacacaactccactccctagccctgca
tcttcacgctctgaaactcctgagagatcaggcaagaaaataagagaggaggaaatacaa
agatcaaattcctctaccccagttagagtggacaggacagaaaaagaccaggcgatcgaa
gaagaaactgtaactccactgtcaaaattgtcaccttcaacagtagattcttctcccatg
gaaggtgatggaaaacggaaacggaaaattcctctcctaacgaaacgcaaaggagatcag
cttactctgcatcctccattagaacttggatacactattactgcagatgacatggactct
gaaaagaaagcacgtcttgacaggattaaaaaagtgttgcaggagaaagacgagccttca
aagtctttggagcctttgatgatagcgccctcagtgccattatttactactcccatcgtg
gaaagctctgctggctcaacacccatttccacctccatttctgccatcgtctccaacccc
ttgctggacagtttgaagatgatgcaggaacacacaagctttacagccacttcagattct
gttaatggaatgaatccaagtaaaatggataaagctccagatgtttccaaaaaagctttc
atgggtgaattattgcttccacctactcctacaactgctgccatgacaataacaactgat
attccaggatttaagccagttgatgctttgaaattctcatgccccaccattacccaatca
cttctaacatcaattaataaacctgctcccaaagctatcaccacgaccacaaactcatgc
caggtttcttctgtggttagtgcacaagaaagtaaacttaacaaagggccagaaatgagt
gcgtctgtctgtacagggaattcttcaactccaagcacaagttttaacctttcgggcaca
atgactgtaatcccaacaggaattagcaccacggcatcttcatctgtcagcatacccgag
tttaagccagtgtttggtttgccagtcacgcagcagactactattgcatcaacaacatta
agttcgattatgtcaattactacacccataagcttggcagcaccagtaacatctaattct
gcagcctcgatcattccattcaagcctgtgttcggaaactctgtgacacctacaactgcg
acgaccacatcggcaccttttaattttggccagtcagttcaagcgaaggttaataatgaa
gcccctcctcccacaactacaaaatcaaattcaactctgttccaatttggagcttccagt
gcattaacaagtacaaacattgagacagaagtgaagtcctcaaacgttgcaattagtttt
ggcttaaatgaaactctttctgcaaaacaaaatatggctcctacggcaagtaacaaccta
tcaagccagcagcaatttcagtttggttcaaacccgtcaacaacaacaacaacaacggcg
actactgctgcatcaggccctgtgttccaatttgggaagacttctatagatgccactgca
acatcagctggcccatcagttcctgtctttggacagccaaacgtagttacaagccaggca
tcaacaagcattgctgctacttcaaatttatttgggaattttactgctgccgtgtcggca
ccttcaaccacatcaagtgttcagctcacacatacatttggaaactcaggaaagacatcc
ctgtttagtaatgccacaagcacacctccatttgggggcatgacagcccagctaaacttt
ggcggcacaagcagtccgtcattatttggagctaatgctgcagcaactcaacaaacccca
actaaaccccctgcctttggcaatattgtaactcccttcaactttggagctacgcctgtc
aaaccaacctttcagaatactacttcacagtctgcatttggaactccgagccagccagtg
ttcggaggtgttacagctcagtctggatttgggccaacttctacacaaccgacttttggt
agcacctcagggggtttcccattcggtacaaccacctcttccactgctactccaatgttc
actgctaccaagagttcaggtactggtgcaactggttcaatctttggctctgcacaaggt
gttgggtttggttccacaaatcagccagccataacaaccagtggtttcagtgttgctgcc
tcaaacccaaatatagcttcagctggtttctttgtttcaggtcagagtgcattttgtgca
tcaaccccttccatcccatttgctacttccaccccaacagcatcatcatcatctcaaaat
atgtttgggtcctcattgactaaccaagggacacagaaccaaagtacttcacagttcaac
tttggagctgcaaacacagttgagaataagtctacttttggagggttcaactttggaact
cccagtttgaattttggaactgggactactgcacctgggtttggacagagtactccaact
gcaaatttttcctttgggaccactaatactccagcatcgaactttgggagtccaggaaca
ggcacagcagcggcatcggcttttgcagcaacaccggccttttctataggagctggatct
cgatctactggaggcagacagagattgcaggctagacggcagcacatacggaagcgatag
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