Leucoraja erinacea (little skate): 129713534
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Entry
129713534 CDS
T09122
Symbol
cpeb1a
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1a isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04114
Oocyte meiosis
leri04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
129713534 (cpeb1a)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
129713534 (cpeb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129713534 (cpeb1a)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129713534 (cpeb1a)
Factors involved in mRNA localization
Trans-acting binding proteins
129713534 (cpeb1a)
mRNA cycle factors
P-body specific factors
129713534 (cpeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEBP1_N
RRM_7
CEBP_ZZ
RRM_1
AF-4
Motif
Other DBs
NCBI-GeneID:
129713534
NCBI-ProteinID:
XP_055518602
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Position
36:complement(9498992..9557635)
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AA seq
564 aa
AA seq
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MAFSLNNERGSGQDCWDVPRSTETPALSTCSNADIFRRINAMLDNSLDFSGVCTTPITKG
RRENVGDLNKSDPGTSSRMLFPTSAQDSSRGLPDTMDLCLGLQSLNLTGWDRPWSTQDSD
TAVTASSSVLGLLTNPLSAQLPRTSVGFPSMDPIGSNYVDQFASALPKRLDSRSVLDSRS
SSPSDSDTSGISSGSDPLSELMTSLRISPPISFLPMGGVSRDSMKRVVMSPRVDQDQISV
TNSMSPNPFKRWSANSGWANWDLLECPEDPFSIEKEARLHRQAAAMSEATFTWRGQLPPR
NYKNPIYSCKVFLGGVPWDITEVGLINTFRVFGSLSVEWPGKDGKHPRCPPKGNMPKGYV
YLVFESEKSVRALLQSCTHDLMSTDGASEYYFKMSSRRMRCKEVQVIPWVLSDSNFVRSP
SQRLDLSKTVFVGALHGMLNAEALATIMNDLFGGVVHAGIDTDKHKYPIGSGRVTFNNQR
SYLNGVGAAFVEIKTPKFTKKVQIDPYLEDSMCHACSAQPGPFFCRDPVCFKYFCRSCWQ
WQHSLEVLRHHRPLMRNQKNRDSS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggctttttctctgaacaacgagcgcggctctggacaggattgctgggatgtgccccgc
tccaccgagactccagccttgtctacctgcagtaatgctgacatcttccgcagaataaac
gcaatgttggacaactctctggacttctcaggagtctgcaccactcccatcaccaagggt
cgcagggagaatgtgggagatttgaataaatccgatccaggaacgagcagcaggatgctg
tttcccacatctgcacaggattcatcacgaggcctcccagacactatggacctgtgcttg
ggcctccagtccttgaatctgactgggtgggaccgaccatggagcactcaggactctgat
actgcagtgactgccagttcatcagttttaggcttgctcactaatccactgagtgcccag
ctgcctagaacatcagttgggttcccatcaatggatccaataggctcgaattatgttgac
caatttgcatccgctttgcccaaacgcttggacagccgttcagtgttggactctcgttca
agcagtccttctgactcggacacaagtggcatcagctctggatctgatcccctttcggag
ctaatgacgagtcttcgcatttctcctccaatttcctttctgccgatgggtggagtaagc
agggattcaatgaaacgggttgttatgagcccccgagtggatcaagatcaaatatcggtc
acaaattcaatgagccctaatcccttcaaaaggtggtcagcaaattctggttgggcaaat
tgggatcttttggagtgcccagaagaccctttcagtattgaaaaggaggccagactgcat
agacaagctgcagcaatgagtgaagctacgtttacttggagaggccagttaccaccccgg
aactataagaacccaatctattcctgcaaagtgttcttgggtggtgtaccctgggacata
actgaagtgggactgataaatactttcagagtatttggttcactgagtgtggaatggccg
ggtaaggatggcaagcaccctcgatgcccacccaaaggtaatatgccgaaaggttatgtc
tacttagtttttgaatctgagaagtctgtgcgtgcattactgcaatcctgcacacatgac
ctcatgagtactgatggtgcaagtgaatattacttcaagatgtcgagtcgcagaatgcgc
tgcaaagaggtgcaggtcataccgtgggtcctttctgacagcaactttgttcgcagccca
tctcagcgcctggatctcagtaaaacagtttttgttggagcactacacggaatgttgaat
gcagaggccttggcaaccatcatgaatgacttatttgggggagtagtacatgctggtatt
gatactgacaagcacaagtatccaattggttctggtcgagtcacctttaataaccagcgc
agttacttgaatggagttggagctgcttttgtggagataaagactccaaagttcacaaag
aaggtgcagattgatccatacctagaggactcaatgtgtcatgcatgcagtgcccagcca
ggaccattcttttgcagagatccagtctgcttcaaatacttctgtcgttcgtgctggcaa
tggcagcactccctcgaggttctccgccatcaccgtccgttgatgcgcaaccagaagaac
cgcgattccagctaa
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