Leptolyngbya sp. O-77: O77CONTIG1_03482
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Entry
O77CONTIG1_03482 CDS
T04251
Symbol
rsmH
Name
(GenBank) Ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
let
Leptolyngbya sp. O-77
Brite
KEGG Orthology (KO) [BR:
let00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
let03009
]
O77CONTIG1_03482 (rsmH)
Enzymes [BR:
let01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
O77CONTIG1_03482 (rsmH)
Ribosome biogenesis [BR:
let03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
O77CONTIG1_03482 (rsmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_5
MTS
Methyltr_RsmB-F
Methyltransf_25
Methyltransf_31
Methyltransf_12
FtsJ
DUF4129
Motif
Other DBs
NCBI-ProteinID:
BAU43650
LinkDB
All DBs
Position
complement(3893669..3894688)
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AA seq
339 aa
AA seq
DB search
MATGPPPDEADGKVLHSDSPAADRLAADPTSGAIAPPHITSEPAFHHIPVLGAEVLTGLA
VKPGGRYLDATAGGGGHSRLILKAAPDTQIVALDQDEQAIAAIRANLAEFGDRVSICHTN
FSAYDPGEVRFDGILADLGVSSVQFDRGDRGFSFRHTAPLDMRMNRQQSLTAADIINTWD
EVELANLFYRYGEERLSRRIAHRIVEQRPFETTTELAEAIARSVPPAYRHGRIHPATRVF
QSLRIAVNDELKVLETFLNIAPDWLAPNGRLVIISFHSLEDRLVKHALRATPALRVITKK
PVQPTDAELSANPRARSAKLRVAERIAEATPASPPKLNR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggctactggcccaccgccggatgaggcggacgggaaggttttgcacagcgactcccca
gcggcagaccgtttagccgcagacccgactagcggggcgatcgccccgccacacattacg
tctgaacccgcctttcaccatattcccgtgctgggcgcggaggtgctgacggggctggcg
gtcaaacctggcgggcgctatctggacgcaacagccggcggcggcggccacagtcggctg
atccttaaagcagcgcccgacacgcagattgtggccctggatcaagacgagcaggcgatc
gccgcgattcgggctaacttggcagagtttggcgatcgcgtctcgatttgccataccaac
ttttcggcttacgatccgggcgaggtgagattcgatggcatcctggcagatttgggcgtg
agttcggtgcagttcgaccggggcgatcgcggctttagctttcgccacacggcccccctc
gatatgcggatgaaccgccagcagtccctgaccgccgccgacatcatcaacacctgggat
gaagtcgagttggccaacctgttttatcgctacggcgaggagcggctatcgcgtcgcatt
gcccaccgcatcgtggaacagcgcccgtttgagacgacgacagaactggcagaggcgatc
gcccgcagcgttccccccgcctatcgacacgggcgcattcaccccgccactcgcgtcttc
cagtccctccgcatcgccgtcaacgacgaactcaaggtcttagaaacgtttctaaacatc
gcaccagactggcttgcgccgaatggaagattggtcattatcagcttccatagcctggaa
gatcgactcgtcaaacacgcccttcgagccacacccgccctgcgcgtcatcaccaaaaag
cccgtccagcctaccgatgcagagttatcggccaatccccgtgctcgctcggccaagctg
cgcgttgcagagcgaattgcagaagcaacgccagcatcaccgccaaaactcaaccgctaa
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