Leptospirillum ferriphilum ML-04: LFML04_0920
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Entry
LFML04_0920 CDS
T02319
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LFML04_0920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_0920
Enzymes [BR:
lfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LFML04_0920
DNA repair and recombination proteins [BR:
lfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LFML04_0920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
CDH1_2_SANT_HL1
DUF1465
ERM_helical
Motif
Other DBs
NCBI-ProteinID:
AFS53152
UniProt:
J9ZBN2
LinkDB
All DBs
Position
860410..860703
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AA seq
97 aa
AA seq
DB search
MAKAKSESREQVLSPKSFEEKMDRLEEIVRVLEGQDRPLEESMALFEEGMKLSNECRDIL
EKTEKKITVLLSREEGEVPFSEEEKTEERGQEPSQDG
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaaagcgaaatcggagtcccgggagcaggttctgtctccaaaaagcttcgaagaa
aaaatggatcgtcttgaagagattgtccgtgttcttgaagggcaggatcgtcctctggaa
gaatccatggctctttttgaggaagggatgaaattgtccaacgagtgcagggatatcctc
gaaaagaccgaaaagaaaattaccgttctgctgagccgtgaagaaggtgaagttcccttc
tccgaggaggagaaaacggaagaaaggggtcaggagccttcgcaggacggctga
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