Lactococcus formosensis: LMK00_09835
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Entry
LMK00_09835 CDS
T08654
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
lfo
Lactococcus formosensis
Pathway
lfo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LMK00_09835 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfo01007
]
LMK00_09835 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfo03016
]
LMK00_09835 (aspS)
03029 Mitochondrial biogenesis [BR:
lfo03029
]
LMK00_09835 (aspS)
Enzymes [BR:
lfo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LMK00_09835 (aspS)
Amino acid related enzymes [BR:
lfo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LMK00_09835 (aspS)
Transfer RNA biogenesis [BR:
lfo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LMK00_09835 (aspS)
Prokaryotic type
Other AARSs
LMK00_09835 (aspS)
Mitochondrial biogenesis [BR:
lfo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LMK00_09835 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
USJ20101
UniProt:
A0A9Q8Y1B8
LinkDB
All DBs
Position
complement(1993591..1995339)
Genome browser
AA seq
582 aa
AA seq
DB search
MKRTNYAGNITEEYLNQEVTVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETATKEIV
EVADKARNEYVLEVTGKVVERASKNENIKTGGIEIEANQMQILSTSKTTPFEIKDGVEVL
DDTRLKYRYLDLRRPEMLNNITMRHATTRAIRSYLDNQGFIDVETPFLNKSTPEGARDYL
VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS
FLGEEEIQDLTEGLIAKVMKDVKNVDVTLPFPRMKYDDAMNFYGSDKPDTRYEMLLTDLT
DLAKTVDFKVFSEAPVVKAIVVKNNADKYSRKAIDKLTEQAKQNGAKGLAWIKFEDDKLA
GPIAKFLTDKTAEFVETLGLENNDLVLFVADSLEVANSALGALRQTIAKEQGLIDYSKFN
FLWVIDWPMFEWSEEEGRYMSAHHPFTLPTAETQGELSGDLSKVRAHAYDIVLNGYELGG
GSLRINTRELQEEMLKALGFSLEDAKEQFGFLLEALDYGFPPHGGLALGLDRFVMLLAGK
DNIREVIAFPKNNKATDPMTQAPSVVSESQLEELRIKLEKLD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ttgaagagaacaaactatgcagggaatattacagaagagtatttaaatcaggaagttacc
gtaaaaggttgggttgcaaagcgccgtaatcttggcggcttaatctttattgatttgcgc
gaccgtgaaggcattgtccagattgtggttaatccagaaacagcaacaaaagaaattgtt
gaggtagcagataaagcccgtaacgaatacgtactagaagttacaggtaaagtcgttgag
cgtgccagcaaaaatgaaaatattaaaacaggtggaattgaaattgaagccaaccaaatg
caaattcttagcacttcaaaaacaacgccctttgagattaaagatggagttgaggtgctt
gacgatacgcgtttgaaataccgttatctcgacttacgccgcccagaaatgctgaacaac
attacgatgcgtcatgcgacgacacgtgctatccgtagctacttagataatcaaggtttt
atcgatgttgaaacacctttcttgaataaatcaacaccagaaggtgcacgtgattacctt
gttccttctcgtgttaataaaggcgagttttatgctttgccacaaagtccacaacttatg
aaacaattgttgatgactgcaggtctcgatcgctactaccaaatcgtaaaatgtttccgt
gacgaagatttacgtggcgaccgtcaaccagaatttacacaagtcgacttagaaacaagc
ttccttggggaagaagaaattcaagatttgactgaaggcttgattgcaaaagttatgaaa
gacgttaaaaacgtcgatgtcactttgccattcccacgtatgaaatacgatgatgccatg
aatttctatggttcagataagccagatacacgctacgagatgctcttgacagacttgaca
gaccttgcgaaaactgtagatttcaaagtgtttagtgaggcacctgttgttaaagcgatt
gtcgttaaaaataatgccgataagtactctcgtaaagctattgataaattaacagagcaa
gctaaacaaaatggtgccaaaggcttagcttggattaagtttgaagacgataaattggct
ggtcctattgccaaattcttgacagataaaactgcagaattcgttgaaactttgggctta
gaaaacaacgatttggttctctttgtggcggacagtttagaagtggcaaattcagcactg
ggtgctttacgtcaaacgattgccaaagagcaaggcttaattgattattcgaaattcaat
ttcctctgggttattgattggccaatgtttgaatggtcagaagaagaaggtcgttatatg
agtgcgcatcacccgttcactttaccaactgctgaaacacaaggggaactttcaggagac
cttagtaaagtccgtgcgcatgcttacgacatcgttttgaatggctacgaactcggtggt
ggttcactccgtattaatacgcgagaattacaagaagagatgctcaaagcactaggcttt
agtttagaagatgccaaagagcaatttggtttcttgttggaagctttagattatggcttc
ccaccacacggaggattggcccttggtttggaccgtttcgttatgttgcttgcaggaaaa
gacaatattcgtgaagttattgcctttcctaagaataataaagccacagacccgatgaca
caagcgccatcagtagtcagtgagagccaactggaagaattgagaattaaacttgaaaaa
cttgactaa
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