Lachnoanaerobaculum gingivalis: QJR73_12670
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Entry
QJR73_12670 CDS
T09491
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lgg
Lachnoanaerobaculum gingivalis
Pathway
lgg00521
Streptomycin biosynthesis
lgg00523
Polyketide sugar unit biosynthesis
lgg00541
O-Antigen nucleotide sugar biosynthesis
lgg01100
Metabolic pathways
lgg01110
Biosynthesis of secondary metabolites
lgg01250
Biosynthesis of nucleotide sugars
Module
lgg_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lgg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
QJR73_12670 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QJR73_12670 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QJR73_12670 (rfbC)
Enzymes [BR:
lgg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QJR73_12670 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WHE87115
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All DBs
Position
complement(2699668..2700222)
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AA seq
184 aa
AA seq
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MGKITVQRCEIEGLCVITPTVFKDDRGYFLETYNQNDFKEAGLDMIFVQDNQSKSSKGVL
RGLHFQKEHPQGKLVRVLSGEVYDVAVDLRKNSKTFGKYFGVRLSDENKKQFYIPEGFAH
GFVVLSDEAVFAYKCTDFYHPNDEGGLIYNDPDIGIDWPIEGIELIMSDKDTKWKGLKET
FKFD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatcacagtacagagatgcgaaatagaggggttatgtgtaattactcctaca
gtatttaaagatgacagaggatattttttagaaacatataatcagaacgacttcaaagag
gcgggacttgatatgatctttgtacaggacaatcagtcaaagtcatcaaagggagtgctt
cgcggacttcatttccaaaaggagcatccacagggcaagcttgtaagagtcttaagcggt
gaagtttatgatgtggctgtagatcttagaaagaattcaaagacattcggaaagtacttc
ggcgtacgtctttctgatgagaacaagaagcagttctacataccggaaggttttgcacat
ggttttgtagtactctcagatgaggcggtgtttgcatacaaatgtacagatttttatcat
ccaaatgatgagggcggtcttatatacaatgacccggatataggaattgactggcctata
gaaggaattgagctgataatgtctgataaggatacaaagtggaaaggtcttaaagaaaca
tttaagtttgattga
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