Lottia gigantea (owl limpet): LOTGIDRAFT_126879
Help
Entry
LOTGIDRAFT_126879 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOTGIDRAFT_126879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgi02000
]
LOTGIDRAFT_126879
04147 Exosome [BR:
lgi04147
]
LOTGIDRAFT_126879
04090 CD molecules [BR:
lgi04090
]
LOTGIDRAFT_126879
Enzymes [BR:
lgi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
LOTGIDRAFT_126879
Transporters [BR:
lgi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
LOTGIDRAFT_126879
Exosome [BR:
lgi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LOTGIDRAFT_126879
CD molecules [BR:
lgi04090
]
Proteins
LOTGIDRAFT_126879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_21
Rad17
AAA_18
AAA_28
Zeta_toxin
AAA_5
AAA_29
AAA_16
AAA_7
AAA_15
G-alpha
nSTAND1
PRK
APS_kinase
tRNA_lig_kinase
UPF0542
Motif
Other DBs
NCBI-GeneID:
20232649
NCBI-ProteinID:
XP_009061328
JGI:
126879
UniProt:
V4BHF6
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
FRFSDCYDVLLMVIGVLVSMLHGAAYPAMVYVFGESIDLFISTGVLEQFLNKPSVKEFLG
TMLDQMFWYAMYYIIIGSSVIILGYIQISVWMITAERQIHRIRLTFYGNILKQDIRWFDL
NDSGQLNSRLSDDIGRIHEGLGDKLGSSVQWISAFLAGCIIGFINGWKLTLVILSISPVL
ILASALMSKLAASLTNKELKAYAKAGSIAEEVLSSIRTVVAFGGQHTEAVRYGENLTEAK
KFGIKKSISNGLCLGFLSFVVMATYSLGFWYGTKLTIIEPEMYSVGKMMIVFYAVFVGSF
SLGNASPGFTALSSARGAAYVIYHMIDQKPAINISNDDGLQPEVVNGYIKFRNVSFSYPS
RPEVQVLKHIDLNVKKGQTVALVGSSGCGKSTVVQLLQRFYDPLDGQISLDGNNVKELNL
NWYRNNIGIVSQEPSLFATTIAENIKFGKEEVTEAQMVEAAKIANAYHFIVQLPQKFNTL
VGERGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDSESESIVQKALDKAREGRTTI
IIAHRLSTIRSADEIYAFQDGAVMERGNHDELLNKRGIYYNLVMNQVSSVEIEEDLHEFI
RTESLRRSGKLERSLSRKSKRSTYTAPPDSDVTQTDTDQSSGGLLTMFAMNSPEWYLIVI
GCLAALLSGSVQPSFAIIFSEVLRVGDDSDHLTDIERQNEVLKLCLILLGIGCGSWLATF
LQSYMFGISGERLTLRLRKNTFTAMLNQEMAWFDREENNTGSLTTKLATEASSIQGATGV
RLGMAFQNISSMGIALVIAFIFGWKLSLLISAFLPFIVIAGAIQIKILAGVAGKNKTALE
NAGKVAVESLDNIRTVTSFSLQERFQKMYSTQLARPYRRALGKAHLAGAAFGFSQSVIFF
AYAASFYYGAYLIRQNEMDYVSVFRVFVAIVFGAYALGQASAFAPDASKAKMAARDICHL
LDRKPTIDCNNVTGTIPQQISSAINFRNVRFGYPTRPDINVLKGLDINIEAGQTVALVGT
SGCGKSTVIQILQRLYDPYSGNILIGGSKVSDLNIQWLRSQIGLVSQEPVLFNRSIKDNI
VYGDLSRTVSTEEVISAARKANIHHFIMQLPKSYDTTVGEKGSQLSGGQKQRIAIARALI
RNPKILLLDEATSALDTESEKVVHEALETARVGRTCIIIAHRLSTIQSADNIVVIRNGTV
IEQGSHSELLKIQGFYYKLYTAQNKTLLH
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
tttagattttctgattgttatgatgtgttattaatggtaattggtgtactggtgtccatg
ttacatggagctgcatatcctgccatggtctatgttttcggtgaatctatcgatctgttt
atcagcaccggtgttttggagcaattcttgaataaaccatcggtaaaagaattcttagga
acaatgttagatcagatgttttggtacgcaatgtattacataatcattggcagttcagtt
ataatattgggatacatacagatttctgtttggatgattactgcagaacgacagatccac
aggatacgattgacgttttatggtaacattctaaaacaagatattcgatggtttgatttg
aatgattcgggacagctgaactcgcgactgtcggatgacattggtagaatacatgaggga
ttgggtgataaattaggttcctctgtacaatggatatcagcatttctagctggttgtatc
attggttttattaatggttggaaactgacgctagtgatactatcaattagtccagtccta
attctagcttcagcgttaatgagtaagcttgctgccagtcttaccaataaagaactaaaa
gcgtatgctaaagcaggatcaatagctgaagaggttttaagttccattcgaactgtggtc
gcattcggtgggcagcacacggaagcagttaggtatggagaaaatttaacagaagcgaaa
aagtttggcataaaaaaaagtatttcaaatggattatgtcttggatttctgtcttttgtt
gtcatggcaacatattctttgggattctggtacgggaccaaattaaccattatagaacca
gaaatgtacagtgttggtaaaatgatgatagtattctatgcagtgtttgttggatcattt
tctctgggtaacgcctcacctggctttacagctttgtcttctgctcgcggtgctgcctat
gttatctaccacatgattgatcagaaaccagctataaatatttcaaatgatgatggacta
caaccggaagtagttaatggttacattaaatttagaaatgttagcttttcatatccatct
agaccggaagttcaggtcctgaagcatatcgatctgaatgttaaaaaaggacaaacagta
gctttagttgggtccagtggctgtggtaaatcaaccgtcgtacagctactgcaaagattt
tatgatcctttggatggacagatatcattagatggtaataatgttaaggaattgaatctg
aattggtatagaaataatataggtatagtcagccaagaaccgagtttattcgccacgacc
atagctgaaaatatcaaattcggaaaagaagaagttacagaagctcaaatggtggaagct
gcaaagatagctaatgcttatcacttcatcgttcaacttccacagaaatttaacacattg
gttggagaacgtggagctcaactcagtggtggacagaagcaacgaatagccattgccagg
gcattagttcgtgatccaaagattttgttactagacgaagctacatctgccttagattca
gagagcgagtctattgttcaaaaggctttagataaggcacgtgaaggacgaactaccatt
attatagcccaccggctatcaaccattagatctgctgacgaaatatacgcgtttcaagat
ggcgccgtaatggaaagaggtaaccatgatgaattattgaataaaagaggaatatactac
aatttagtaatgaatcaggtaagttcggtagaaatagaagaagatttacatgaatttatt
agaacagaatcgcttagaagaagtggaaaactagaacgaagtttatctagaaaaagtaaa
agatcaacttacacagcacccccagactccgacgttacccaaactgatacagaccagagt
agtggtggattattgacaatgtttgccatgaattctccagaatggtacctcatagtgata
ggatgtttagcagccttattgagtggttccgtccaaccatcctttgccatcatcttttca
gaagttttacgtgtaggtgatgatagtgaccatctaacggatattgagcgtcaaaatgag
gtcttaaaactatgtttgatattgctaggaataggatgtggaagttggttagcgactttc
ttgcagagttacatgtttggtatttccggagaaaggctgacgttgagactgcgtaagaat
acatttacagccatgttaaatcaagaaatggcctggtttgatcgagaagaaaataataca
ggatcactgacgactaaattagccacagaggcatcgtctatacaaggggcaacaggagta
agactgggaatggcgtttcagaatatttccagtatgggtattgctcttgtcatcgctttc
atttttggttggaagctcagtctactgatttcagccttcttaccatttatcgttattgct
ggtgccatacaaatcaaaattttagctggtgtggctggtaaaaataaaacagccttagaa
aatgctggaaaggttgctgttgaatctttagacaacatacgaacagtgacgtcattttca
ttacaagaaagattccagaagatgtactcaacccaattagctagaccttatcgaagagca
ttagggaaggcacatttggcaggagctgcctttggattttcacagtctgtgatattcttt
gcctatgcagcctcattttactatggtgcctatttgattcggcagaatgaaatggactat
gtctcggtgtttagggtgttcgttgctattgtatttggtgcctatgcattaggacaagca
agtgccttcgctccagatgcatccaaagctaaaatggcggcacgtgatatttgtcatctg
ttggacagaaaaccaaccattgattgtaacaatgtgacaggtacaataccacagcagata
tccagtgcaatcaactttagaaacgtgagatttggataccctactcgaccagatataaat
gtgcttaaaggattagatataaatatagaagcaggacagacagtagctctagtcggtact
agtggttgtggaaaatcaacagtcattcaaatattacagagattatatgatccatattcc
ggcaacattcttattggtggaagcaaggtttcagatttgaacattcaatggctacgatct
cagatcgggttagtatcacaagagccggtacttttcaatagaagtattaaagacaatata
gtttatggagatttatctcgaactgtttcgactgaggaagtaatatctgctgctagaaag
gccaatatccaccattttattatgcagttaccaaagagctacgacactactgttggtgag
aaagggtcccaactcagtggtggacagaaacaaagaatagccatcgccagagctttaatt
cgaaatccaaaaatacttttattagatgaagctacgtccgctttagatacagagagtgaa
aaggtagtacatgaagccttagaaacagcccgagttggtagaacgtgtattataatagca
catcgtttgtctacaattcagtcagctgataatattgtagtcattagaaatggtacagtc
atagaacaaggatctcattcagaactactcaaaatacagggtttttattataaactatat
acagcacaaaataaaacattattacattga
DBGET
integrated database retrieval system
