Lottia gigantea (owl limpet): LOTGIDRAFT_138363
Help
Entry
LOTGIDRAFT_138363 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
lgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_138363
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_138363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_138363
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_138363
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
LOTGIDRAFT_138363
Spliceosome [BR:
lgi03041
]
Complex C
Other components
EJC/TREX
LOTGIDRAFT_138363
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
LOTGIDRAFT_138363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
20234044
NCBI-ProteinID:
XP_009046859
JGI:
138363
UniProt:
V4AY23
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MNYFVDICTTTVPFQMLADMFDMLTLEKSEQVFSIVEENVNVWKSAGFYDAGKNFLLRMC
NDLIRRLSKSQNTVFCGRIQLFLSRLFPLSERSALNLMSQFNLDNVTIFNTHGDESKFKT
VSHHDSTQEFMEIEEGEMADFPSSSFPIDYNLYKRFWSLQDYFRKPLQCYEKSSWKTFVS
HADEVLKAFDSCKLDDLKSQRKKLDHSKQMDTQTFFAKYLTSEKLLDLQLSDSNFRRYVL
VQFLIVFQYLNAQVKFKSASQTLTDDQTAWIKTATEKVTSLIKETPPDGDKFAESVDHIL
QREENWNNWKNEGCISYVREKLSQEKEPTEKARVRAKRKRVGDDLMASSGKINMGSPELT
RLWNINANNMEACKADSRIFLPNINEYFAEAIDQADPDAMIEDEYILLNKPYFQWRSLRL
LARRSPHFFTQLNPPFIPLNKYLEIMVNKIAQDMPVSFYHTILCE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaactattttgtagatatttgtacaactacagtaccatttcaaatgttagctgatatg
tttgatatgcttactctagaaaaatcagaacaagtatttagtattgttgaagaaaatgtt
aatgtttggaaatcggctgggttttatgatgctggtaaaaatttcctattaagaatgtgt
aatgatttaatccgtcgattatctaagtctcagaatacagtattttgtggaagaattcag
ttatttctgtctcgtctatttcctttatctgaaagatctgctttgaatctaatgagtcag
tttaatttagataatgtaactatatttaatactcatggtgatgaaagtaaattcaaaact
gtaagtcatcatgatagtacacaagaatttatggaaatagaagaaggtgaaatggctgat
tttccttcaagttcatttcctatagattacaacctatacaaaagattttggtcattacaa
gattattttcgtaaaccactacaatgttatgaaaaatcatcttggaagacatttgtatca
catgcagatgaagtattaaaggcatttgatagttgtaaattagatgatttgaaatctcaa
cgtaaaaaacttgatcattccaaacaaatggatacacaaacattctttgcaaagtatctc
actagtgagaaattattagatctacagttatcagacagtaattttagaagatatgtttta
gttcagtttcttattgtatttcaatatctgaatgctcaagttaaattcaaaagtgccagt
caaacattaacagatgatcaaacagcctggatcaagacagctacagagaaagtaacgagt
ttaattaaagaaactccaccagatggcgacaagtttgctgaatcagttgatcatatactt
caacgtgaagaaaactggaataattggaaaaatgaaggttgtattagttatgtcagagaa
aaattaagtcaagaaaaagaacctactgaaaaagctagagttagagcaaaacgaaagaga
gtaggagatgatttaatggctagtagtggtaagataaatatgggtagtccagaattaacc
aggctgtggaatattaatgctaataatatggaagcttgtaaggctgactctcgtatattt
ctaccaaatattaatgaatattttgctgaggctattgaccaagcagatcctgatgccatg
atagaagatgaatacatattgttgaacaagccttattttcaatggagatcactacgatta
ttagctagaagatcaccccatttctttactcaacttaatcctccttttataccattgaat
aaatatctggagatcatggtgaataaaatagcacaagacatgcctgtaagtttttatcat
accatattgtgtgagtag
DBGET
integrated database retrieval system