Lottia gigantea (owl limpet): LOTGIDRAFT_141904
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Entry
LOTGIDRAFT_141904 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
LOTGIDRAFT_141904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_141904
Membrane trafficking [BR:
lgi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
LOTGIDRAFT_141904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Fusion_gly
CagA_N
GldM_1st
DUF3958
DDHD
Motif
Other DBs
NCBI-GeneID:
20234504
NCBI-ProteinID:
XP_009049739
JGI:
141904
UniProt:
V4CCF8
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MSSQKFESLEDDLCSIIDNAKVTVERKIKNYSGEERKSAARQVENKLEDAYLILQEMEGE
AKVAPVNYRTQMLGRIRNYKSDIESISRSLKQRTTGASSSGSRGFNTEDRMEASQRSKLL
QGHQSLQRTSDSIARSQQISEETDQIGVEIIGELGEQRETLVRTRDRLHETDGNLVRSRK
ILKGMARRVMTNKMILIVIILVELGIVGGLVYWKFFS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcaaaaatttgagtcgttggaagacgatttgtgctccattattgacaatgca
aaagtgacagttgaaaggaaaataaagaattattctggagaggaaagaaaaagtgcagcc
agacaagttgaaaataaactagaagatgcctatctcatcttacaagaaatggaaggtgaa
gccaaagttgctcctgtcaattacaggacacaaatgctgggaagaatcagaaattataag
tctgatattgaaagtatatccagatcattaaaacagaggacaactggagccagcagctcg
ggttcgagaggtttcaatacagaagacagaatggaggcatcacagcgctcaaaactactt
cagggacaccaatcattacaaagaacgtctgacagtatagcaagatcgcagcagatatct
gaagaaactgatcaaataggagtggaaattattggagaattgggtgaacagagagagaca
ttagttcgtacgcgagatagacttcatgaaacagacggtaatttagttcgcagcagaaaa
attttaaaaggaatggcaaggagagttatgacaaataaaatgattttaattgtgattatc
ctagtagaattgggcattgtagggggattagtgtattggaagtttttctcgtga
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