Lottia gigantea (owl limpet): LOTGIDRAFT_155173
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Entry
LOTGIDRAFT_155173 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
LOTGIDRAFT_155173
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lgi01002
]
LOTGIDRAFT_155173
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_155173
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_155173
Enzymes [BR:
lgi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
LOTGIDRAFT_155173
Peptidases and inhibitors [BR:
lgi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
LOTGIDRAFT_155173
Ubiquitin system [BR:
lgi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
LOTGIDRAFT_155173
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
LOTGIDRAFT_155173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF3526
Motif
Other DBs
NCBI-GeneID:
20236619
NCBI-ProteinID:
XP_009063918
JGI:
155173
UniProt:
V3ZMY9
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MVVADDVNGPAKKKPRLSLKASKKTTPSTADEASKVASATPLDFTNNSETASSNIGSDTQ
EVSAESCVPYDGPLVPPVSSLENLGNTCFLNSILQVLRYTPKFLTGLTELYTNIIILEKA
AKEKFKQESLKEENESQEEETDLSWELVKHLYKMYKDMDNNEERYSEIASADVTSMAVKP
NRILDIIREFNPMFEGNFQHDAQELLRCLLCYLEDAEKALNVKTEEFEPYIVKPIAKANS
IMTKFLMAGKTAAPKCEQAKDLKNGLTSLNLDTKLAKGDVLEVHNSSTQKKNQSKRKASK
RLSESDLTNEKDSRNSTELSGRRRLSAGSVDETRSQPSVATMFNKSEVPRRRLGMRGAVV
SPPASSTSSQFASTDLNNNVDFMHDVNNNENSVPSRNPLRSKSPAELASSLGKLSCDSPS
KDTDLKEAQVRLQKCDRVCDSPLKTVSANEAIKNLSFNKRKRDMDSPINKFTNQAVNRTK
VTAEINESPAKRKVTFDQDTSSSFQLRHTYSPIATSPKTLYLNNSLSPTAAFKDKMCSPS
PLRRSPRKSESPLKPNIVTTPTKMCTTVTKMSPCNLISSATSSAIVSPRRQSPRLNRNHL
ESPTANSSNSPKAMFKSPLGSISPSPAKRKVNFDLPHAEGISSPNACRKSPRNVYILPSP
KKSESTSSRSSSAEIKKEPVIRYDFVERLFQGTMMLRTKCIECEFSRERKEDFQDVSVPL
RREKEEVESDEEVEGEVDDSCLSKLMSAFSEVERLKEDNKYFCENCFRYVEAERSLHYEV
LPDVLTLHLKRFSASDRLYGSLTKINDHITLPVTLPCLQYQCPRFCNKPSHRYSLYGIVT
HAGTTITSGHYLSYVKIDSNSKNEIKVEPEGPNAHLANLSTTPFSTEWYECDDEAIRICS
DEDFRQKLIGKESSLMGTPYVLFYHRQNLLS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggttgtagcagatgatgttaatggaccggccaaaaagaagccaaggctgtctttaaag
gccagtaagaagactactccttcaacagctgatgaagccagtaaagttgcctctgctaca
ccactagatttcacaaacaacagtgaaacagccagtagcaatattggtagtgatacacaa
gaggtgtctgccgagagttgtgttccttacgatggtcctttagtaccaccagtttcttct
ttagaaaatttaggaaatacctgttttttaaacagtatattacaagtattaagatataca
cctaaatttctaactggtcttacagaactttataccaatattattatactagaaaaggca
gcaaaagaaaaatttaaacaggaaagtttaaaagaagaaaatgaaagtcaagaagaagaa
actgatttatcatgggaattagtcaaacatctttataagatgtataaagatatggataat
aatgaagaaaggtacagtgaaatagctagtgctgatgttacaagtatggcagttaaacct
aatagaatactcgatattattagagaattcaatccaatgtttgagggaaatttccaacat
gatgctcaagaacttcttcgttgtctgttatgttacttagaagatgctgaaaaggccttg
aatgttaaaacagaggaatttgaaccttacattgtcaagccaatagcgaaagcaaattcc
atcatgacgaaatttcttatggcaggaaagacagccgcacccaaatgtgaacaagccaag
gatttgaaaaatggactgacttcattgaacttagatactaagttagctaaaggagatgtt
ttagaagttcataattcatcaacacaaaagaaaaatcaaagcaaaaggaaagcatcaaaa
agattgtctgaatctgatctaaccaatgagaaagatagtcgaaattcaactgaactaagt
ggcagacgacgtctatctgctggatctgttgatgagactagaagccagccaagtgttgct
acaatgttcaacaagagcgaggtacccaggagaagattgggtatgcgaggagctgttgta
tcaccaccagcaagcagcacatcttctcagtttgcttccactgatctcaacaataatgta
gactttatgcatgatgtcaacaacaacgaaaattcagtaccaagtcgcaatccattacgt
tccaaatcaccagctgagttagcttccagcttgggtaaactgtcatgtgattctccatca
aaggacactgatttgaaagaagctcaagtacgtctgcagaaatgtgatcgagtatgtgat
agtcctttaaaaactgtgagtgctaatgaagccattaaaaacttaagctttaacaaacgc
aaacgagacatggactctccaatcaacaagtttacaaatcaggctgtgaataggactaaa
gtaacagcagaaatcaatgaatcacctgcaaaaagaaaggtaacttttgatcaagacacc
tcaagctcttttcaacttaggcacacttactcaccgatagcaacctcccctaaaacactt
tacctcaacaactcattatcacccacggcagctttcaaagacaaaatgtgctcaccatca
cctttaaggagatcaccaagaaaatcagaatcaccacttaagccaaatatcgtaaccact
cccaccaagatgtgtactactgtcactaagatgtcaccatgcaacctcatatcatctgct
acatcttcagccattgtatcaccgaggagacagtcaccaagactaaaccgaaatcatcta
gaatcaccaacagcaaactcctcaaattcaccaaaagctatgtttaaatcaccccttgga
tcaatctctccatcacctgccaaaagaaaagtgaactttgacctgccacatgcagaagga
atatcatcaccaaatgcttgtcgtaaatcaccaagaaatgtctatattttacccagtcca
aagaagtctgaaagtacttccagcagaagttcttcagcagaaataaagaaggagcctgtg
ataagatatgattttgtagaaagattgtttcaaggcaccatgatgttgaggactaaatgt
attgagtgtgagttttctagagaaaggaaagaagattttcaagatgtcagtgttccttta
agaagagagaaagaagaggtggaatcagatgaagaagttgaaggagaagtggatgattcc
tgtttatcaaaactcatgtcagccttttcagaagttgaaagattaaaagaagataataaa
tatttctgtgagaattgttttcggtatgtggaggctgaaagatcacttcattatgaagta
ttaccagatgttttaacattacatttaaaaagattctctgcatctgataggttgtatggt
agtttaactaaaataaatgaccatatcactttaccagttacactgccttgtttacagtat
caatgtcctagattttgtaataaacctagtcataggtattcattatatggtattgtaaca
catgctggtacaaccattacctctggccactatctatcttatgtcaaaattgattccaac
tctaagaacgaaataaaagtagaaccagaaggacccaacgcccaccttgccaatctgtcc
acaaccccctttagtacagaatggtatgaatgtgatgatgaagctattcgaatctgcagt
gatgaagattttcgccaaaagttgattggcaaagagtcctcattaatgggaacaccttat
gtcttgttttaccacaggcaaaacttactctcttaa
DBGET
integrated database retrieval system
