Leguminivora glycinivorella (soybean pod borer): 125230954
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Entry
125230954 CDS
T09956
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125230954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125230954
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125230954
Spliceosome [BR:
lgly03041
]
Complex A
U2 snRNP components
U2 related factors
125230954
Complex B
125230954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
125230954
NCBI-ProteinID:
XP_047992220
EnsemblRapid:
ENSLGLG00000002749
LinkDB
All DBs
Position
11:15918930..15938058
Genome browser
AA seq
1011 aa
AA seq
DB search
MVRSGRDRERDRERRRSHSRSASPDRKRRRSRSRSRDRASKSSKRKRSRSRERDSKRDRS
RERDRDRKSDKRDDKRNGASSKSSRKKSPDKDRDRSKSKEKSIKQESTEYDPGSVDKEEE
QVRLEAEMQKRRDRIERWRAERKRKELESAKKEVQKGSIVSNIQIPAKKWSLEDDSGDEG
EMARNGEDSESKEKAAVEEKMETEDEIDPLDAYMQEVQQEVRKVNQMDQQRGMTVPTNGG
TGVVILTGTAKKKVTEQKNKGELIEQNQDGLEYSSEEENEDIKDTAANLASKQRKELAKV
DHAALDYMPFRKAFYTEVSELARMTSEEVEAYRTELEGIRVKGKGCPKPIRTWAHCGVSK
KEMDILKKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPSLE
DTDGPISLIMTPTRELCMQIGKDIRKFAKSLGLTVVCVYGGTGISEQIAELKRGAEIIVC
TPGRMIDMLAANSGRVTNLRRVSYIVLDEADRMFDMGFEPQVMKIIDNIRPDRQTVMFSA
TFPRQMEALARRILQKPIEIQVGGRSVVCKEVEQHVAVLEDDAKFFKLLELLGLYSQMGS
IIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVKLLVATSVAAR
GLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYAGDVLRALELS
GAPVPPALRQLWETYKEAQEKDGKKVHTGGGFSGKGFKFDESEAMAATEKKKYQKAALGL
QDSDDEDVEGDLDQQIETMLAAKKIVKEIKPGVATPGVPAGAAAAAGADGKLELARRLAS
RINLAKGLGAEHKGATQQAAEAILKGAPSAHTLITAKTVAEQLAAKLNTRLNYQPRDESA
NEPAEEVFRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVPPGKNPPE
GERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQTSAHHMVNKARYKVL
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggtcagaagcgggcgtgatagagaacgcgatcgtgaacgtcgccgctctcacagtcgg
tcagcttcgcctgaccgcaaaagacggcgctccaggtcaaggagtagagaccgagcatcc
aaatcttcgaagaggaagcgtagccgcagcagagaaagggattctaagagagatcgcagc
agggaaagagatagggacaggaaaagtgacaaacgcgatgacaaacgcaatggcgcaagc
agtaagtcatcaaggaaaaagtctcctgataaggatagagacagatcaaaatccaaagag
aaatctatcaaacaggagtcaacagaatatgaccctggctctgtggacaaggaagaagag
caagtgcgcttagaggcagaaatgcaaaagcggcgcgaccggattgagcgttggcgggct
gaacgcaagcgaaaagagcttgaatcagccaagaaggaggtccagaagggcagcatagtc
agcaacattcagatacctgccaagaagtggtctctggaggatgactctggcgatgaaggt
gaaatggctcgcaatggtgaggatagcgagagtaaagaaaaagccgcagttgaagagaaa
atggagacagaggatgagatcgacccactagatgcttacatgcaagaggtccaacaggag
gtgcgtaaagtgaaccaaatggaccagcagaggggaatgactgtgccaacgaacgggggc
acgggcgttgttattctgacgggcactgccaagaaaaaggtcacagaacagaaaaataaa
ggagagctaatagaacaaaaccaggacggtctagaatattcctcggaagaggaaaacgag
gacatcaaggacacagcggcgaacctcgcgtccaagcaaaggaaggagttggctaaagtg
gaccatgccgctttggactatatgccgtttaggaaagccttctatactgaggtcagcgag
ttagcccgaatgacatctgaagaagtagaagcataccgcaccgaacttgaaggtatccgc
gtaaagggcaaaggctgccccaaacccatcagaacctgggcgcactgtggcgtgagcaag
aaagagatggatatactgaagaagctcaactttgagaaacctacccctatacaggcccag
gctattccagctatcatgtcgggaagggacttaataggcatagcgaagaccggttccggc
aagacacttgccttcatcctgcccatgtttcgacatgtcttagaccagccttctttggaa
gacacagacggacctatatcgcttatcatgacgcctactagggagttgtgtatgcagatt
gggaaagatataaggaaattcgccaagtctttgggtttaacggttgtctgtgtttatgga
ggcactggaatatcggaacagattgccgaattaaagcgaggtgcagagatcatagtttgc
actccgggccgaatgattgacatgttagctgccaactctggccgcgttactaatctgcga
agagtctcctacattgtgttggatgaagctgaccgcatgtttgacatgggctttgagccg
caggtgatgaagataatcgacaacatccgtccggaccggcagacggtgatgtttagtgca
acgtttccgcgccagatggaggcgcttgccaggcgcatcctgcaaaaacctattgaaatt
caggtcggcggccgcagtgtcgtctgcaaagaggtggaacagcacgtggccgttctagaa
gacgatgccaagttcttcaaactgctggagttgctcgggctgtacagtcagatgggcagc
atcatagtcttcgtggacaagcaggagaatgccgacagtctgctcaaggacctgatgaag
gcgtcgtactcctgcatgagtttacatggagggattgatcaattcgacagggactccacc
attgtggacttcaagaacgggaaggtgaagcttcttgtggctaccagcgtggctgcgcga
gggctcgatgtgaaacagctggtgcttgtagttaattacgactgtccgaaccattatgag
gattacgtgcacagatgcggacgcaccggacgggcaggcaacaaaggtttcgcctggaca
ttcctcacaccagaacaagggagatacgcgggcgatgtgctacgagcgttagaacttagc
ggggcgcccgtacctccagctctaaggcaattgtgggaaacgtacaaagaagcgcaagaa
aaggacggcaagaaggtgcatactggaggaggattcagtggaaaggggttcaaattcgac
gaatccgaagcaatggcggcgacagaaaagaagaagtaccagaaagcggcgctcggtctt
caggattctgatgacgaggatgtggaaggagacctggaccagcagatcgaaaccatgctg
gctgctaagaagattgtcaaggagatcaagccgggcgtagcgactcccggcgtgcctgcc
ggcgcagcggccgcggccggggccgacggcaagctggagttagctcgaagactggcgtct
cgtatcaacctggccaagggattgggagctgagcataagggagccacgcagcaggctgct
gaggccatcctcaagggcgcgccttctgcacacacactcatcacggctaagacggtagct
gaacagctggcggctaaactgaacacccggctgaactaccagccgcgggatgagagcgcc
aacgaacccgccgaagaggtgttcaggaaatatgagacggagttggagatcaatgatttc
ccgcagcaggcacgctggcgggtcactagcaaggaagccctggccctcatcagcgagtac
tccgaagccggcatcaccgtccgaggcacctacgtgcctcccggtaagaatccacccgaa
ggcgagcgcaagctgtaccttgccatcgagagctcgcaagagctggccgtcgccaaggcg
aagtctgagatcactcgcctgatcaaggaggaactgcttaaactgcagacttcggcccat
cacatggtcaataaggctagatataaagttttgtag
DBGET
integrated database retrieval system
