Leguminivora glycinivorella (soybean pod borer): 125231904
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Entry
125231904 CDS
T09956
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03013
Nucleocytoplasmic transport
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125231904
09122 Translation
03013 Nucleocytoplasmic transport
125231904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125231904
03041 Spliceosome [BR:
lgly03041
]
125231904
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125231904
Spliceosome [BR:
lgly03041
]
Complex C
Other components
EJC/TREX
125231904
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125231904
BRITE hierarchy
Motif
Pfam:
efThoc1
Death
DUF5906
Motif
Other DBs
NCBI-GeneID:
125231904
NCBI-ProteinID:
XP_047993460
EnsemblRapid:
ENSLGLG00000006283
LinkDB
All DBs
Position
12:complement(20392666..20403203)
Genome browser
AA seq
667 aa
AA seq
DB search
MSEKMGFETLRAKYKDVLSKAFSTNNIDLLDSFSKNINESDRKAAMDQAFRDKLLELLTE
DAETLESYVSFCIESCRRHMVTPTMPVVLLGDIFDALTLNKCEKMFTYVENGVNIWKEEL
FFVACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENVT
EFGGDNTSTLKDSLDEEMMVEEKTKLNIDYNLYCRFWSLQDFFRNPNTCYNKIQWKTFVA
HSGSVLSAFSSYKLEAIELQKSKMNRLKPVTDDEMQGTKEQHYFAKFLTNQKLLELQLSD
SNFRRCVLIQFLILFQYLSSSVKFKMETQELKKDQTDWVKETTTLIYKLLGETPPDGQRF
AECVQHILKREEHWNAWKNDGCPEFQKPKPPASGDDEIRKSKVRRRPVGDIIKEYEGQQK
CYLGNNDLTKLWNLCPDNLSACRTKERDFMPSLQSYMATALEPGVGARRTADGAWGWRAL
RLLARRSPHFFIHTNTPIGRLPDYLADMVKRVTRDATLAESSSNGDAGVTIKQELKQEPT
EEEVNEEQMEEVMIKEEDNNDMEQVPDSTNDEYDDKAARSRVTMLTPAQMDALCPALGDW
KKLAAKLGYKPDEIQFFESENATDLLRAKNMLQLWCDDDEDASVENLLYIMEGLGMVEAC
EALKNAK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaagatgggattcgagacgttacgagcaaagtacaaagatgtgctctcaaaa
gctttcagcaccaataacattgacttgcttgactcgttctctaagaacattaacgagtcg
gatagaaaagccgctatggaccaagcatttcgtgacaaacttctcgagctcctaactgaa
gacgcggaaacacttgagagctatgtaagcttctgtatagaatcctgcagacggcacatg
gtgaccccaacgatgcccgtcgtacttctgggtgacatattcgacgctctaaccttaaat
aagtgtgaaaaaatgtttacctatgttgaaaatggcgtaaacatttggaaggaagagcta
ttctttgttgcttgcaagaataatttactaagaatgtgcaacgatttgctacggcgatta
tctcggtcgcagaacactgtgttttgcggaaggattcttttgtttttggctaaattcttc
ccattttctgagcgttccggtttgaacatagtgtcagaatttaatctggagaatgtgacg
gaatttggcggtgacaatacaagcaccctaaaggactctttggacgaagaaatgatggtg
gaagagaaaactaagctgaacatagactacaacttgtattgtaggttttggagcctgcag
gactttttcaggaatccaaatacttgttataacaagatacagtggaaaacttttgttgct
cattccggcagtgtcctatccgccttctcctcctacaagctagaagcgatagagctccag
aagtccaagatgaaccgtctaaaacccgtcaccgatgatgaaatgcaaggcacgaaggaa
cagcactacttcgccaagttcctgactaatcagaaactgctggaacttcaattgtcggac
tcgaattttaggagatgtgtgctcatacagtttttgatactgttccagtatttgtcgtca
agtgttaagtttaagatggaaactcaagagctaaaaaaagatcagacagactgggtaaaa
gagactacaaccttgatatacaagttgctaggagagactccgcctgacgggcagcggttt
gcggagtgtgtacagcacatactcaagagagaggagcattggaatgcttggaagaatgat
gggtgccctgagttccagaagccaaaacctccagcatcaggtgacgatgagattcgcaag
agcaaagtccgtagacgccccgtcggagacatcatcaaggaatatgagggtcaacagaaa
tgctatttgggaaacaatgatctgaccaagctgtggaacctgtgtccagacaatctttcc
gcctgtcgcactaaagaacgggacttcatgccttcactacagagctacatggcaacagct
ttggaaccaggcgtcggtgcgcggagaacagctgacggtgcttggggctggcgcgctcta
cggctactagcgagacggtcaccacacttcttcatacacactaatacgcctataggccgg
ttacccgactacttggctgacatggtgaaacgcgtaacccgcgatgctacgttggcggag
tcgagtagtaacggcgatgctggcgtcaccatcaagcaagagctcaaacaggagcccacc
gaggaggaggtgaatgaagaacagatggaggaggtgatgataaaggaggaggacaacaat
gatatggagcaggtccccgactcaacaaacgacgaatacgacgacaaagccgcccgctcc
cgcgtcactatgctaacaccggcacaaatggacgcgctctgccccgcgctcggtgactgg
aagaaactcgccgccaaactagggtacaagcccgacgaaatacagtttttcgagtctgaa
aacgctacggacttactcagagcgaagaacatgcttcaactgtggtgtgatgacgatgag
gatgcttcggtggaaaacttactttatatcatggaggggctggggatggtagaagcgtgt
gaagctcttaagaacgctaagtga
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