Legionella geestiana: E4T54_02970
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Entry
E4T54_02970 CDS
T06170
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lgt
Legionella geestiana
Pathway
lgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4T54_02970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgt03019
]
E4T54_02970
03009 Ribosome biogenesis [BR:
lgt03009
]
E4T54_02970
Enzymes [BR:
lgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E4T54_02970
Messenger RNA biogenesis [BR:
lgt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E4T54_02970
Ribosome biogenesis [BR:
lgt03009
]
Prokaryotic type
rRNA helicases
E4T54_02970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
adh_short
CMS1
AAA_19
HEM4
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QBS11788
UniProt:
A0A0W0TWL0
LinkDB
All DBs
Position
complement(675725..677431)
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AA seq
568 aa
AA seq
DB search
MTDQAITFASLALSEPLLQALSDMQFVTPSAIQAQTIPPLLAGNDVVGQAQTGTGKTAAF
ALPILHRLTPKSRETQALVIAPTRELAIQVAEQCMTLGARMQGLTVAILCGGQDYRTQLK
QLRDGAQIVVGTPGRILDHLDRGTLQTAALNTVVLDEADEMLRMGFIEDMESILSRLPET
RQTALFSATMPPRIRQIANRYLKDPVSVEIRMETATVKSIEQRFLFASQAQKPDALIRVL
AVEDYQGVIVFVRTKSGTEEVAEALQEQGMRAMAIHGDLTQALRERIIDQFRKGAIDILV
ATDVAARGLDVERVTHVINYDVPHDCETYVHRIGRTGRAGRSGVTILFVTPRESRMLNLI
ERHTRQRIEKILVPDAYTIENTRRERFVANVRARLTHEHINDYRELVNTLTQDGETSALD
IAAALALLAQQDKPWSRELPKPAPKPAREDDSWRREREPRFSREKPARFGREKPRFEGRE
SRAFADDSGPQELYRIDVGRIHGVKPGNIVGAIANEAGLQGRQIAGIKIHDDHTTLRLPG
GMSKAVLSTLAKAWVCGRKLNLTSLGSA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccaagctattaccttcgcctcactcgcgttgtccgaaccccttttacaagcc
ctcagtgacatgcagtttgtcacgccttctgcgattcaggcacagaccataccgccactc
ctcgctggtaacgacgttgttggccaggcacagaccggtaccggaaaaaccgccgctttc
gcgctgcccattctgcatcgtttgaccccaaaatcacgtgaaacacaggcgcttgttatc
gcgcctacccgcgagcttgccattcaggtggcagagcagtgcatgacactgggagcccgc
atgcaggggcttaccgttgccattctctgcggtggccaggattatcgcacccagttgaag
cagcttcgtgacggcgcgcagattgttgtcggcacaccgggccgaattctcgatcacctc
gaccgaggtacgctccagactgcggctttaaataccgtcgttcttgatgaagcggatgaa
atgctgcgcatgggctttatcgaagacatggagtccattctttcgcgcctgccggaaacc
cgccagactgcactcttttcagcgactatgccgccacgcattcgccagattgccaaccgt
tatctgaaagacccggtttccgtagaaattcgcatggaaacggcaacggttaaaagcatt
gaacagcgttttctctttgcctcacaggcacaaaagccggatgcactgatacgtgtgctg
gcggttgaagactatcagggcgtgattgtgttcgtgcgcaccaaaagcggcacggaagaa
gttgcagaagcgctacaggagcaggggatgcgcgccatggcgattcatggtgatttaacc
caggctcttcgcgagcgcattattgaccagttccgcaagggtgcgattgatattctggtc
gcaaccgatgtggccgcgcgcggacttgacgttgaacgggtgactcacgttatcaactac
gatgtaccgcatgactgtgaaacctacgtgcaccgtattgggcgaaccgggcgtgccggt
cgcagtggggtgacgattctttttgtgacaccccgagaatcgcgcatgctgaatctcatt
gagcgccatacgcgccagcgcattgaaaaaatcctggtgccggatgcctataccattgag
aatacacgccgtgagcgttttgtggcgaatgtgcgtgcgcgcctgacgcatgagcacatt
aacgactaccgtgaactggttaataccctgacacaggatggtgaaaccagtgcccttgat
attgccgcagcccttgcgcttttggcgcagcaggataaaccgtggtcgcgtgaactgcca
aaacccgctcctaaacccgcgcgtgaagatgacagctggcggcgtgaacgcgagccgcgt
ttcagccgtgaaaagccggcacgatttggtcgcgaaaaaccccgttttgagggccgcgaa
agtcgcgcctttgctgatgacagcgggccgcaggagctctatcgcattgatgtaggccgc
attcatggggtgaagcctggcaacattgtcggtgccatcgccaatgaagccggattacag
gggcgccagattgcgggtattaaaattcatgacgaccataccacgctgcgcctgccgggc
ggcatgtctaaagcggtcttaagcacccttgcaaaagcctgggtctgcgggcgcaagttg
aacctgacgtcgcttggcagcgcgtga
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