Lysobacter gummosus: LG3211_3655
Help
Entry
LG3211_3655 CDS
T04163
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00521
Streptomycin biosynthesis
lgu00523
Polyketide sugar unit biosynthesis
lgu00541
O-Antigen nucleotide sugar biosynthesis
lgu01100
Metabolic pathways
lgu01110
Biosynthesis of secondary metabolites
lgu01250
Biosynthesis of nucleotide sugars
Module
lgu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LG3211_3655 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LG3211_3655 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LG3211_3655 (rfbC)
Enzymes [BR:
lgu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LG3211_3655 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ALN92597
LinkDB
All DBs
Position
complement(4040370..4040927)
Genome browser
AA seq
185 aa
AA seq
DB search
MKIIETDLPGCLIVEPQVFGDSRGYFYESFNRDKLAKAGLDLSFAQGNVSSSARGVLRGL
HYQWPKPQGKFVSVIEGEVWDVAVDIRRGSPHFGRWTAAVLSGENKRHFWIPEGFAHGFA
VLSEKAVFTYLCTQTYDAQADAGLRWDDPDLAIDWPISEPTLSAKDQATPLLKDVAAERL
PDYAA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcatcgaaaccgatctgccgggctgcctgatcgtcgaaccgcaggtgttcggc
gattcgcgcggctatttctacgagtcgttcaatcgcgacaagctcgccaaggccgggctg
gacctcagcttcgcccagggcaacgtgtcctcctccgcgcgcggcgtgctgcgcggcctg
cattaccagtggcccaagccgcagggcaagttcgtctcggtgatcgagggcgaagtctgg
gacgtggccgtggacatccgccgcggttcgccgcatttcggccgctggaccgcggccgtg
ctcagcggcgagaacaagcgtcatttctggataccggaagggttcgcgcatggcttcgcc
gtgctcagcgagaaagcggtattcacctatctgtgcacgcagacctacgacgcccaggcc
gatgccggcttgcgctgggacgatccggatctggcgatcgactggccgatcagcgagccg
acgctgtcggccaaggatcaggccacgccgctgttgaaggacgtcgccgcggagcggttg
ccggactacgcggcatga
DBGET
integrated database retrieval system