Lysinibacillus varians: T479_18430
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Entry
T479_18430 CDS
T03062
Name
(GenBank) penicillin-binding protein
KO
K18770
penicillin-binding protein 4 [EC:
2.4.99.28
3.4.16.4
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00550
Peptidoglycan biosynthesis
lgy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T479_18430
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lgy01003
]
T479_18430
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
T479_18430
Enzymes [BR:
lgy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
T479_18430
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T479_18430
Glycosyltransferases [BR:
lgy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
T479_18430
Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
T479_18430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Rv2525c_GlyHyd-like
Motif
Other DBs
NCBI-ProteinID:
AHN23013
UniProt:
A0A806LU73
LinkDB
All DBs
Position
3622512..3624362
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AA seq
616 aa
AA seq
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MKKVFGFIIVTLCLPTIWWIGTNIRAELSTAQAHEQQIQKKIEVPEVQVQLPVTLVDQNG
QTFSEEYVEWRQPLTLQEIPQIAQEIFIASEDADFYNHVGFDLSAILRAVVANSNTNSAS
QGGSTITQQLVRMRYLSDEKTYERKLTELFYAYELEKKYDKDAILTMYLNESYFSNQVYG
IGSAASYYFQKPIQELSIAQIAFISAIPNNPSLYNPLKHFDDTKARQERLLDTLATSGVI
TKEDAVTYKAEPITLNVKNKVQSYPMYSTYVLQELRWLVAEKEGYTDRLLNTQSEEEKKT
IQAQLDNRLNTLYQNGLTIYTALDPTKQNHDEERITAILGNGQLQAAGAVINNSSREVVS
LYAGKNYEKFDYHRAYQGPRQPGSAFKPLAVYAPYFETTTHTPDSIVNGGRYCVGSFCPQ
NYGGYNYGDVTIHTAFRNSYNTSALRIFNAVGVDTAFSYLDRFHFRSMVAKDHTYAASLG
GLTYGVTALELADAYTSFIDGSYVLAHSIRKVTANDGTELYSWDKARDQIWSPKTVKYMR
GLLAEVVSNGTGQGVYSNSSYVGAKTGTTNDYRDYWLAGLNDQYTAAVWLGYDKPQPMEK
LEAYKIHHKLFNVLLE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtttttggttttattattgtaacgctatgtttacctaccatttggtggatt
ggtacaaatatacgagcagagctgagtacagcacaagcccacgaacaacaaattcagaag
aaaattgaggttcccgaagtacaggtacagcttcctgtcacattagttgatcagaacggc
caaacctttagtgaggaatatgtcgaatggcgacaacctttaactttacaagaaattcca
caaattgcccaggaaatttttattgctagtgaggatgcagacttttataatcatgtcggc
ttcgatcttagcgctatcctacgcgcggtggttgctaactcaaacaccaattcagcttca
caaggaggcagtaccattacccaacagcttgttcgtatgcgttatttatctgatgaaaaa
acatacgaaagaaaactaacagagctattttatgcctatgaacttgaaaagaaatacgat
aaagatgccattttaacgatgtatttaaatgaatcctattttagcaatcaagtttatgga
ataggtagtgcagcaagctattattttcaaaaacctatccaagaattatcgattgcacag
atagcgtttatttcagctatccctaacaatccttctctttataaccctttaaaacatttt
gatgataccaaggcaagacaagaacgtctacttgatacactcgcgacaagtggtgttatt
acaaaagaagatgcagtgacgtataaagcagaaccaattactttaaatgttaagaacaag
gtacaaagctatccgatgtatagtacttacgttcttcaagagttacgctggctagtagcc
gagaaggaaggctatacagatcgactgctcaacacgcaaagtgaagaagaaaagaaaact
attcaagcacaactagacaatcgacttaatactttatatcagaatggtttaactatttat
actgcactggatccaactaaacagaatcatgatgaagagcgcataactgctattttaggc
aatggccaattacaggcggcgggtgctgttattaacaattcatctcgtgaagtcgtcagc
ctctatgctggaaaaaattacgaaaagtttgattatcatcgagcctatcaaggtccgcga
cagccagggtcagcctttaagccacttgctgtctatgcaccctattttgaaacaacaact
catacgccagactccattgtcaatggtgggcgctattgtgtcggttctttttgtcctcaa
aattatggaggatataactacggtgatgtgacaattcatacagcattccggaatagttac
aatacgtccgctcttcgcatttttaacgctgtgggggtagatacagctttcagttatctt
gatcgcttccatttccgttccatggtggcaaaggatcatacttacgcagcttcattaggt
ggattaacatatggcgtcactgctcttgaacttgcagatgcctatacaagctttatcgat
ggctcttatgtgctagcccacagtattcgaaaagtaacagctaatgatggcactgagcta
tatagttgggacaaggcacgtgaccagatttggtcgcctaaaaccgtaaaatatatgcgt
ggtctgcttgcagaagttgtctcaaatggtacggggcaaggggtttatagcaatagtagc
tatgttggggctaaaacaggtacgacaaatgattaccgtgattattggctagctggttta
aatgaccaatataccgctgccgtgtggcttggctatgataaaccacagccaatggaaaaa
ctagaagcgtacaaaattcatcacaaactctttaatgttttactagagtaa
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