Legionella hackeliae: LHA_0995
Help
Entry
LHA_0995 CDS
T03809
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
lha
Legionella hackeliae
Pathway
lha03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LHA_0995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lha03400
]
LHA_0995
Enzymes [BR:
lha01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
LHA_0995
DNA repair and recombination proteins [BR:
lha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LHA_0995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
UvrA_inter
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
CEK10056
UniProt:
A0A0A8URC6
LinkDB
All DBs
Position
I:1009106..1011601
Genome browser
AA seq
831 aa
AA seq
DB search
MGLDIYHRKRDFKKTPEPKGRIRQDKNKNYRFVIQKHAASRLHYDFRLELDGVLKSWAVP
KGPCLDPNAKRLAVHVEDHPLEYGSFEGVIPKGEYGGGTVMLWDEGKWEPLDEDPRKAYE
KGHLRFELHAKKLHGRWDLFRFKNEDNSWFLVKYEDEFARPLDDYDITLKKPNSVVTDKS
LDEIAENYDNIWTKEGLESSEKKKIKEEIDGLIPAELKASPFPERISPQLTTLVDKPPQG
SQWLHEIKFDGYRIIAFKDGKSIRLISRNNIDWTRKFKNVIKALQHLPATRVIVDGEVVL
LNDKQKTDFQRLQNAMKGDKDYPFYYYIFDLLYYEKFNLKSLPLLQRKEILEKLLLNAPS
ALQYSDHIAGHGENVLNKSCELGLEGIISKDSQSTYQERRSKSWVKIKCIKRQEFVIGGY
LKPQRSRQYFRSLLLGVFNDEGELIYTGNVGTGFTESSLKEVYTELQKNLKDENPFNSIF
PDAKNAIWVNPVLIAEVEFSQWTSEGKLRHPSFKGLRKDKEAGAIKREEEVAIKTINKKT
PQSRKITISSPEKILYNQDNITKQDLYDYYDKISEFILPFVRNRPLTLVRCPESYKECFY
QKHYYKSTPKALCAIPIKNKSDDEVEQYIYLKDKEGLLSLVQIGALEIHPWGSRIDNVES
PDMITIDLDPGTDVSWKEVVKAAFEIKKHLEAFKLTCFVKTTGGKGLHVVVPIFPEYNWE
EVKNFTHVFVEFLERINPNAYVTNMAKAKRKGKIFVDYLRNQRGATAISAYSTRARLHAP
VATPIHWDELTNDIKDTFYTIHTLPQRLKKLKDDPWKEFWNIKQSLRLDEL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggggttagatatttatcaccgaaaacgcgatttcaagaaaacaccagaaccgaaggga
agaattcgccaagataaaaataagaattatcgctttgttatccagaaacatgcagccagt
cgtcttcattatgattttcgtttagagcttgatggggttcttaaaagttgggcagtgcca
aaaggaccttgtctggatcctaacgctaaacgcttggcagttcatgtggaggaccacccc
cttgagtatggttcttttgagggtgtaattcctaaaggggaatatggcggcggtacggtg
atgctttgggatgagggaaaatgggagcctttggatgaggatccacgaaaagcttatgaa
aaaggacatttgcgttttgaattacatgcaaagaaattacatggccgctgggatcttttt
cgttttaaaaatgaagataactcctggtttttagtgaaatatgaggatgagttcgcaaga
ccgttagatgattacgatatcactcttaaaaaaccaaatagtgttgtaactgataaatcc
ttagatgaaattgccgaaaactatgacaacatatggactaaagaggggttagagagtagc
gagaaaaaaaaaattaaagaagaaatcgatggattaattcctgctgaacttaaagccagt
ccctttccagaacgaatttcccctcaactcactaccttagtggataagccgccccaaggt
tcacaatggttgcatgaaattaaatttgatggctatcgaattattgcttttaaagacggt
aaatcaattcgcttgatatctcgaaataatattgattggacgagaaagtttaaaaatgtc
attaaagcattgcaacatttgccggctacaagagtcatagtcgatggtgaggtggtgcta
ctcaatgataagcaaaaaactgattttcagcgtttgcaaaatgcaatgaagggcgataag
gattatcccttttactattatatttttgatttgttgtattatgagaaatttaacctcaag
agcctacccttattacaacgaaaggaaattcttgaaaaattattgctgaatgccccatca
gcgttacaatacagcgatcatattgccggccatggcgaaaacgttcttaataagtcttgc
gaattaggattagaagggatcatttctaaagatagtcaaagtacctatcaggaaagacgc
tctaaatcatgggtaaaaatcaaatgcatcaagcgccaggaatttgttatcggtggttat
cttaaacctcaacgctcaagacagtattttcgttccttgcttctcggtgtttttaatgat
gaaggtgaattaatctatactggaaacgttggtacaggtttcaccgagtcttctttaaaa
gaggtatataccgaattacaaaaaaatttaaaggatgaaaatccctttaactccattttt
ccagatgccaaaaatgcgatatgggttaaccccgtcctgattgcagaagttgagtttagt
cagtggacatcggaaggaaagttaagacatcctagttttaaaggattaagaaaggataaa
gaggcaggagcaatcaaacgcgaggaagaggtggctataaaaaccattaataaaaaaaca
cctcagtcaaggaagatcactatttctagccctgaaaaaattttatataaccaagataat
attaccaaacaagatctctatgattattatgataaaatcagtgaatttatcttacctttt
gtcagaaatagacccttaacattagtaagatgcccagaaagctataaggagtgtttttat
caaaaacattattacaaatccacccctaaagcactttgcgcaatccccattaaaaataag
tctgatgatgaggtagagcaatatatttatctaaaggataaagagggtttgttgagtttg
gtgcaaataggagcattagaaattcatccctggggaagtcgcattgataatgtcgagtca
cctgacatgatcaccattgatttagaccccggaactgatgtttcgtggaaggaggttgta
aaagctgcatttgaaattaaaaaacatttggaagcatttaaacttacctgttttgtcaaa
acaacaggaggaaagggcttacatgttgttgttcctattttccctgaatataactgggaa
gaagtaaaaaattttacccatgtttttgtcgaatttctggagcgaataaatcccaacgct
tatgtgactaatatggcaaaggcaaaaaggaagggcaaaatatttgttgattatttgcgt
aatcagcgaggtgctactgctattagtgcctactccaccagagctcgtttacatgcgccg
gtcgctaccccaattcattgggatgaattaaccaatgacatcaaagataccttctatact
attcatactttgccccagcgactcaaaaaattaaaagatgacccttggaaagagttttgg
aatattaaacaatcgctaagactcgatgagttgtaa
DBGET
integrated database retrieval system