Schleiferilactobacillus harbinensis: D1010_03465
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Entry
D1010_03465 CDS
T06855
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb00190
Oxidative phosphorylation
lhb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
D1010_03465
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1010_03465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhb03019
]
D1010_03465
Enzymes [BR:
lhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
D1010_03465
Messenger RNA biogenesis [BR:
lhb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D1010_03465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QFR22575
UniProt:
A0A510TW82
LinkDB
All DBs
Position
708141..710306
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AA seq
721 aa
AA seq
DB search
MDLAKPEYFFNRELSWLDFNSRVLEESRDKDNPLLERVRFLAITQSNLDEFFNIRVASLH
KMVRVGYTGTDAAGLTPQAQLAGISEKTHAMVEKQYTTLNRSLLPKLAEADIHLLHFADL
RPAQVDFVDNYFHQTVMPVLTPLAVDVSRPFPFIANNTLNIALRLAKKNSKKDKSFALMQ
VPDVFPRVVKLPGGDNVFILLEEVIKHYMEELFVGFSIKAMGLFRLTRDMDLDVEEEDAS
DLMKEIEKQLKKRERGGVMRIEIDADMDDRLVKRLTKELNLTPDSIYPVNGPINLKFLGQ
LIKAISGHRDLLFPSFTPYEPAPLTEHSMFSLIAQHDIFVHHPYDSFAPVVNFIKQAAED
PQTLAIKMTLYRVSSHSPIITYLKQAAQNGKQVTVLVELKARFDEENNVHWANELERAGC
HVIYGLVGLKTHCKLTLIIRQEENGIRRYMHMGTGNYNDVTARLYTDMGLFTADVDMGLD
ASNIFNMLSGFSEPPYFHKLVIAPIGIRKFLHEQIDGEIANARAGKKAFIQMKMNSLSDT
DMIEKLYEASAAGVEIHLLVRGICNLRPGIPGISDNITVHSIVGRFLEHSRIYYFYADGE
EHVFLSSADLMNRNLSRRVELLFPLLVDAVRQQAINIYNILWDDTVKTRVLHNDGTWTHV
DGRGLPRLNAQEYLLAHAQSIADTLWPELETEKKRVDDESPRQFIPLMSDPSKDDDSGKK
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacttggcaaagcctgagtatttctttaatcgtgaattatcgtggctcgacttcaat
tcccgagtcttggaagagtcgcgggataaggataaccctttactggagcgggtgcgcttc
ttagccatcacccaaagcaatctggatgagttcttcaatatccgggtggcctccctgcac
aagatggtgcgggtggggtacactgggacggatgctgcgggcttaacgccccaagcgcaa
ttggccgggatcagcgaaaagacccatgcgatggtggagaaacagtacaccactttgaac
cggtcgctgctgccgaaattggccgaagccgatattcacctgctgcactttgcagacctg
cgtccggcccaagttgacttcgtggataactatttccaccaaaccgtgatgccggtcctg
accccgttagccgtggacgtgtcccggccgttccccttcatcgccaataacacgctgaac
atcgcgctgcgcctggccaagaagaacagtaagaaggacaaatcctttgcgctgatgcag
gtgccggatgtctttccacgggtggtcaaactccccggcggcgacaatgtcttcattctg
ctggaagaagtcatcaagcattatatggaagaactcttcgtcggcttcagcatcaaggcc
atgggtctgttccgtctgacccgggacatggatctggatgtggaagaagaggatgcctcc
gatttaatgaaagaaatcgagaagcagctgaagaaacgcgagcggggcggcgtgatgcgc
atcgagatcgatgccgacatggacgatcggctggtgaagcggctgaccaaggaattgaat
ctgactccggatagtatttatccggtcaatgggccgatcaacctgaagttcctcggccaa
ttgatcaaggccatcagcgggcaccgggatctgcttttcccgagcttcaccccctacgag
ccggcaccgttgactgaacacagtatgttctccctgatcgcccagcatgatatttttgtt
caccacccctacgattccttcgcgccggtggtcaacttcattaagcaggcggctgaagat
ccccagacgctggccattaagatgaccctctaccgggtatcgtcccattcgccaatcatt
acctatctgaagcaggcggcgcaaaacggcaagcaggtcaccgtgctggtggaactcaag
gcccgcttcgatgaagagaacaacgtgcactgggctaacgagctggaacgggccgggtgt
cacgtgatctatggtctggttggcttgaagacccactgtaagctgactttgatcattcgg
caggaagaaaacggcattcgccggtacatgcacatgggcaccggaaactacaacgacgtg
accgcccggctgtacactgacatgggcctgttcacggccgacgtggacatggggctggac
gcgtcaaatatcttcaacatgttgtccggtttctctgagccgccatatttccacaagctg
gtgattgcccccattggtatccgcaagttcttgcacgagcagatcgatggcgaaatcgcc
aatgcccgggcagggaagaaagccttcattcaaatgaagatgaattctttgtctgataca
gatatgatcgagaaactgtacgaagccagcgccgcgggggtcgagattcatctgctggtc
cgcggcatttgcaacctgcggcccggcatcccgggaatcagcgacaatatcacggtgcat
tccatcgttggccgcttcctggagcacagccggatctactatttctacgccgatggagaa
gagcatgtcttcctgtccagcgccgacttgatgaaccgcaatctgtcccgccgggtcgaa
ctgctcttcccgctgctggtggacgcggtgcgtcagcaagccatcaacatttataacatt
ctatgggacgacacggtgaagacccgggtcctgcacaacgacggcacgtggacccacgtg
gacggccgcggcctgccccggctcaacgctcaggaatacctgctggcccacgcgcaatcc
attgccgatacgctttggccagaactcgaaaccgagaagaaacgggtggacgatgagtcg
cctcgccagttcattccattgatgagtgatccaagcaaggatgacgattcaggaaagaag
gattag
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