Lactobacillus helveticus KLDS1.8701: HUO_00875
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Entry
HUO_00875 CDS
T03777
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lhd
Lactobacillus helveticus KLDS1.8701
Brite
KEGG Orthology (KO) [BR:
lhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhd03032
]
HUO_00875
03400 DNA repair and recombination proteins [BR:
lhd03400
]
HUO_00875
Enzymes [BR:
lhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUO_00875
DNA replication proteins [BR:
lhd03032
]
Prokaryotic type
DNA Topoisomerases
HUO_00875
DNA repair and recombination proteins [BR:
lhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUO_00875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJY60637
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All DBs
Position
169024..171507
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AA seq
827 aa
AA seq
DB search
MDDNQTQDRRIRNVDLTSMMRSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELGV
TPDKQYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDEP
AAMRYTEARMSKIAVEMLRDINKNTIDWQRNYDDTENEPVVLPARIPNLLINGANGIAVG
MTTNIPPHNLSEVISGLHMLMKNPDATTKDLMKVIPGPDFPTGGIIMGRGGIYRAYESGK
GNIVVRAETNIETEKSGRERIIVSEIPYMVNKAELVKKIADLAREKIIDGITGVRDESDQ
TGMRITIDIRRDASASVVLNNLFKQTQMQANFGMNMVAIVDGAPHYLTLKQMLQYYLDHQ
KDVVTRRTKFELAKAEARAHILEGLRIALDNIDEIVHIIRSSHSSDIAKATLISRFGLDD
KQSQAILDMRLVRLTGLERDKVEAEYKELQAKIADYKDILAKPERIDKIIYDELLDIQKR
FGDKRRTEIGASEVVSIEDEDLIEKQNILLTVTHNGYIKRMPIQEFKTQNRGGKGIKGMG
VQDGDFIEHLIYSSTHDMLLFFTNAGKVYSKKAYEIPEYGRMAKGLPVVNLLQLEKGEKV
QTVINVPEGADDNYLFFITKMGTVKRTHVSEFSNIRNSGLIALTLRDGDELSNVLTTDGK
QNILIGTHLGYAVTFNENDVRAMGRTAAGVRGINLRDHDYVVGSGVLDADDQVLVISENG
YGKRTPAAEYPVKGRGGKGIKTANITEKNGPLAGVIVISKGKDIMVITTDGIMIRFKTKD
VSQTGRSTMGVRLIKVSDDSQVASLTIVPSEADQDQVDDEDDNDDNE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatcaaactcaagatcgtagaattagaaacgtcgatttaactagcatgatg
cgtagttctttcttggactatgcaatgtcagttattgtagctcgtgctttgcctgatgtt
cgtgatggtttgaagcctgtacagcgccgtattctttacggaatgagcgaattaggtgtt
acacctgataagcaatataagaagagtgccagaattgttggggaagttatgggtaagttt
cacccacacggtgactcatcaatttatttagctatggctcacatggcacaagacttttca
tatcgttacatgctagttgacggtcacggtaactttggttccgtcgacggggatgaacca
gccgcaatgcgttataccgaagcaagaatgagtaaaatcgctgtggaaatgcttcgtgat
atcaacaaaaatacaatcgactggcaaagaaactatgatgatactgaaaatgaaccagta
gttttgccagctagaattcctaacttgttgattaacggtgctaatggtatcgctgttggt
atgacaaccaacattccacctcataacttaagtgaagtaattagcggtttgcatatgttg
atgaaaaatcctgatgcgactactaaggatttgatgaaagttattccaggtcctgatttt
ccaactggtggtattatcatgggtcgcggtggaatttaccgtgcttatgaaagtggcaag
ggcaatatcgttgttcgtgctgaaaccaacattgaaactgaaaagagtggccgtgaaaga
attatcgttagcgaaattccttacatggtcaacaaggctgaattagttaaaaagattgca
gatttagctcgtgaaaagatcattgatggtattaccggtgttcgcgatgaatctgaccag
actggtatgagaattaccatagatattcgtcgggatgctagtgcgagtgttgttttgaat
aatttattcaagcaaactcaaatgcaggccaacttcggcatgaacatggttgccattgtt
gacggtgcacctcactacttaactttgaagcaaatgttgcaatactacttggatcaccaa
aaagatgttgtaacgcgtagaactaagttcgaattagccaaggctgaagctagagctcat
attcttgaaggtttaagaatcgctctagataatatcgatgaaattgttcatattatccgt
agcagtcattcaagtgatattgctaaagcaactttaattagtcgttttggtcttgatgat
aagcaatctcaagcaattttggatatgcgtcttgtacgtttaaccggtttggaacgagac
aaggttgaagccgaatataaagaattgcaagctaagattgctgactacaaggatattttg
gctaagcctgaacgaatcgataagatcatttacgatgaattattagatattcaaaaacgt
tttggtgataagcgtagaactgaaatcggtgctagtgaagttgtttcaattgaagacgaa
gatttaattgaaaagcaaaatattcttttgactgtaactcataatggctatatcaagaga
atgccaattcaagaatttaagacccaaaaccgtggtggtaaaggtatcaagggtatgggc
gttcaagatggagacttcattgaacacctaatttactcaagtactcacgacatgcttttg
ttctttactaatgctggtaaagtttactcaaagaaagcatatgagattccagaatatggt
cgtatggccaaaggcttgcctgtagttaacttgcttcaacttgaaaagggcgaaaaggta
caaactgtaatcaacgttccagaaggagcagatgataattacttattcttcatcactaag
atgggtaccgtaaaacgcactcatgtaagtgaattttcaaacattagaaatagtggtttg
attgctcttactttgcgtgatggggatgaattaagcaatgtccttactactgacggtaag
caaaacattttaattggtactcatttaggctatgcagtaacctttaacgaaaatgatgtt
cgtgctatgggtagaactgctgcaggtgttcgcggaattaacttgcgtgatcatgactat
gtagttggttcaggcgtattagatgcagacgaccaggtattagtcatttctgaaaatggt
tatggtaagcgtactccggctgcagaatatccagttaagggccgtggtggtaaaggtatc
aagactgctaatatcactgaaaagaatggtccacttgctggcgtaattgtcattagcaag
ggcaaggacatcatggttatcactaccgatggtattatgattcgctttaagactaaggat
gtttctcaaactggacgtagcaccatgggtgttcgcttaatcaaggttagcgatgatagt
caagttgcaagtttaaccattgttccatctgaagctgatcaagatcaagttgatgatgaa
gatgacaatgatgataatgagtaa
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