Companilactobacillus heilongjiangensis: JP39_04280
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Entry
JP39_04280 CDS
T04057
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lhi
Companilactobacillus heilongjiangensis
Pathway
lhi00260
Glycine, serine and threonine metabolism
lhi00460
Cyanoamino acid metabolism
lhi00630
Glyoxylate and dicarboxylate metabolism
lhi00670
One carbon pool by folate
lhi00680
Methane metabolism
lhi01100
Metabolic pathways
lhi01110
Biosynthesis of secondary metabolites
lhi01120
Microbial metabolism in diverse environments
lhi01200
Carbon metabolism
lhi01230
Biosynthesis of amino acids
lhi01240
Biosynthesis of cofactors
Module
lhi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JP39_04280 (glyA)
09102 Energy metabolism
00680 Methane metabolism
JP39_04280 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JP39_04280 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JP39_04280 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JP39_04280 (glyA)
Enzymes [BR:
lhi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JP39_04280 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
PhoU_div
STI1-HOP_DP
Motif
Other DBs
NCBI-ProteinID:
ALB28637
UniProt:
A0A0K2LBF6
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All DBs
Position
complement(938316..939560)
Genome browser
AA seq
414 aa
AA seq
DB search
MVVVQYSTGDKEIFDLINKEENRQNRNIELIASENIVSDNVRKAQGSVLTNKYAEGYPGH
RYYGGCEYIDQVEQIAIDRAKKLFNAEYVNVQPHSGSQANAAAYQAVLKPGDSVLGMDLN
AGGHLTHGSKVNFSGKMYNFHSYGVNAEGLIDYDDVQKIAEEVQPKLIVAGASAYSRIID
FKKFREIADSVGAYLMVDMAHIAGLVAVGLHPTPVGVADIVTTTTHKTLRGPRGGMILAK
AELGKKLNSAVFPGTQGGPLEHVIAGKAVAFGEDLQPEFKTYMEQVIKNAAAMAKVINDA
DNLSVLTGGTDNHLLNVVLTECDLNGMEVQNLLDTIHITTNKEAIPNDPLPPKFTSGLRL
GSPAITSRGFDEEDCEEVARIIVDAIKYHDDPEKLQELDARTKALTDKHPVEFN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtagtgcaatacagtacaggtgataaggaaatttttgatctaatcaataaggaa
gaaaatcgacaaaatagaaatatcgaattgattgcttctgaaaatatcgtttctgacaat
gttagaaaagcccaaggttcagttttaacaaacaagtatgctgaaggttatccagggcac
cgttactatggtggttgtgaatacatcgatcaagtcgaacaaatcgcaattgaccgagca
aagaaattattcaacgccgaatatgtcaacgttcaaccacattcaggttcacaagctaat
gctgccgcctaccaagctgttttaaaacctggtgactcagttctaggtatggatttaaat
gcgggtggtcacttaacacacggttcaaaagttaatttctctggtaaaatgtataacttc
cattcatatggtgttaatgctgaaggtttaattgactatgacgacgtccaaaaaattgct
gaagaagttcaaccaaaacttatcgttgcgggtgcttcagcttatagccgtatcatcgat
ttcaagaagtttagagaaattgctgattcagttggcgcttacttgatggtcgatatggct
cacattgctggactcgttgcggttggattacaccctactccagttggagttgccgatatt
gttactacaactactcacaaaactctcagaggcccccgtggtggtatgattttggctaag
gctgaacttggtaagaaacttaattcagctgtcttccctggcactcaaggtggtccattg
gaacacgtgattgctggtaaagctgttgcttttggcgaagacttacaaccagaattcaaa
acttacatggaacaagttattaagaatgctgctgctatggcaaaagttatcaatgatgct
gataatttatcagttctaactggtggtacagacaaccacttgttaaacgttgttttaact
gaatgtgacttgaatggtatggaagttcaaaacttacttgatactattcacatcacaact
aacaaggaagccattcctaacgacccattgcctcctaaatttacatctggccttcgttta
ggttctcctgctattacatcaagaggatttgacgaagaagactgtgaagaagtagcacgt
attattgttgatgctatcaagtatcacgatgatcctgaaaaacttcaagaattggatgca
cgtactaaagctttgactgacaagcatccagttgaatttaactaa
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