Laribacter hongkongensis: LHK_02994
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Entry
LHK_02994 CDS
T00884
Symbol
rfbC
Name
(GenBank) RfbC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk00521
Streptomycin biosynthesis
lhk00523
Polyketide sugar unit biosynthesis
lhk00541
O-Antigen nucleotide sugar biosynthesis
lhk01100
Metabolic pathways
lhk01110
Biosynthesis of secondary metabolites
lhk01250
Biosynthesis of nucleotide sugars
Module
lhk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LHK_02994 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LHK_02994 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LHK_02994 (rfbC)
Enzymes [BR:
lhk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LHK_02994 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACO75972
UniProt:
C1D5F5
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Position
complement(2908642..2909190)
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AA seq
182 aa
AA seq
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MKVIDTAIAEVKIIEPRVFEDERGFFFESFNQQRFEEAIGYPVEFVQDNHSRSSRGVLRG
LHYQQAPHAQGKLVRCVAGAVWDVAVDLRQSSPTFGQSVGVELSAGNRRQLWIPAGFAHG
FLTLSESAEFLYKTTDYYAPAAEVCLRWNDPVLAIAWPEAVSPVLSVKDGQGLDWHQAPR
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatcgatacggcgattgccgaagtcaagatcatcgagccgcgcgtgttcgag
gatgagcggggtttctttttcgagagcttcaaccagcagcgttttgaagaagccattggc
tacccggtggagttcgtgcaggacaatcacagccgttcatcacgcggcgtgttgcgcgga
ctgcattaccagcaggcaccgcatgcccagggcaagctggtgcgctgtgtggctggcgcg
gtgtgggacgtggccgttgatctgcggcaaagctcaccgacattcggccagtcggtcggt
gtggagttgtctgccggcaaccggcggcaactgtggattccggccgggtttgcccacggc
ttcctgaccttgagcgagtcggccgaattcctctacaagaccacggattattacgcgccg
gcagcagaagtgtgcctgcgctggaatgaccccgtactggcgattgcatggccggaggcg
gtcagtccggtgctgtccgtgaaggacgggcagggtctggactggcatcaggcgcccagg
tttgcctga
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