KEGG   Paucilactobacillus hokkaidonensis: LOOC260_117140
Entry
LOOC260_117140    CDS       T03598                                 
Name
(GenBank) competence protein ComF / DEAD/DEAH box helicase
  KO
K02240  competence protein ComFA
Organism
lho  Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:lho00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lho02044]
    LOOC260_117140
Secretion system [BR:lho02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   LOOC260_117140
SSDB
Motif
Pfam: Helicase_C ResIII DEAD Staphostatin_B AAA_30 AAA_19
Other DBs
NCBI-ProteinID: BAP86220
UniProt: A0A0A1GW60
LinkDB
Position
complement(1684103..1685437)
AA seq 444 aa
MDAEFFYGRRLLDQELTDEFELPKHVQISAAMEVTNTYVRCTRCNYNSSLSEVALPKEQY
FCPQCITMGRVSTLSKFYYLPEPNLFKANKHPLSWNGQLSELQQKCSLEVCRCLQKHERH
LLWAVTGAGKTEMLFEAISQAIQRGERIALASPRVDVCLELYPRLQQAFATIDICLLHGR
ETKPYQYRQLTICTTHQLLRFYHAFDNLIIDEVDAFPYAENQQLYFATKQAVKPTGGCLY
LTATPGPKLLQQVRQKQLGISYLPLRYHGHLLPEIKIKLTPAWRQQLKQKKLPNSLVLAI
KLRIEKQQPFLLFAPHVADLGLIKASLNKRFPGQKCVTVHAADEQRLEKVQLMRDHKVLF
LVTTSILERGVTFPEIDVLVLGADDAVFSSAALVQISGRAGRSISRPTGDVIFWIGAYAT
SIRLAIKQIKFVNKKGHRLVQCNA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggatgctgaatttttctatggacggagactactagaccaagaactaacagacgaattt
gaactgccaaaacacgtgcaaatttcagcagcaatggaagttacgaatacttatgttagg
tgcactcgttgtaattataacagttcattaagcgaagtagcattaccaaaagaacaatat
ttttgcccacaatgtatcacgatgggcagggtatccacgttatctaaattttattattta
ccagagcctaatttatttaaagcaaataagcatccattaagttggaatggacagttgtct
gagttacagcaaaagtgttcgttggaggtctgtcgttgcttacaaaaacatgaacgacat
ctgttatgggcggtcactggtgctggtaaaacagagatgttatttgaagcaatcagtcag
gcaatacagcgcggagaacgaattgcccttgcttctccgcgagtggacgtttgcctggag
ctatatccgcgtttgcaacaagcgtttgctacaattgatatttgcttattacacggtcga
gaaacaaaaccataccaatatcggcagttaacgatttgtacgacgcaccagttactgcgt
ttctaccatgcatttgataatttgattattgatgaagtcgatgctttcccatatgctgaa
aatcagcaattgtattttgccactaagcaggcagttaagccaactggtggctgtttgtat
ttgacagctactcctggtcctaaattgttacaacaagtgcgacaaaaacagttaggaatc
agttatttgccattgcgatatcatgggcacttattacctgagattaaaattaagttaact
ccagcgtggcgacaacaattaaaacaaaaaaaattacctaattcgttagtcctagcaatc
aaattacgaattgaaaagcagcaaccttttttattatttgccccgcacgttgctgattta
ggattgattaaagcaagcttgaataaacgttttccgggacaaaagtgtgtgacggtgcat
gctgccgatgaacagcggctggaaaaagtacaactgatgcgcgatcataaagtattgttt
ttagtgacaacttctattttagaacgaggcgtcacatttcctgaaattgatgttttagta
ttgggggctgatgacgcagttttttcaagtgcggcattggtacaaatttcaggtcgagca
ggtcgttcaatttcgcggccaacgggggatgttatattttggattggcgcatatgcgacc
agtatacgattagcgattaaacagataaaatttgtaaataaaaaggggcatcggctggta
caatgcaatgcttaa

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