Lactobacillus helveticus R0052: R0052_00030
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Entry
R0052_00030 CDS
T02217
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lhr
Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhr03032
]
R0052_00030
03400 DNA repair and recombination proteins [BR:
lhr03400
]
R0052_00030
Enzymes [BR:
lhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
R0052_00030
DNA replication proteins [BR:
lhr03032
]
Prokaryotic type
DNA Topoisomerases
R0052_00030
DNA repair and recombination proteins [BR:
lhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R0052_00030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MutL_C
Motif
Other DBs
NCBI-ProteinID:
AFR21054
LinkDB
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Position
6247..8730
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AA seq
827 aa
AA seq
DB search
MDDNQTQDRRIRNVDLTSMMRSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELGV
TPDKPYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDEP
AAMRYTEARMSKIAVEMLRDINKNTIDWQRNYDDTENEPVVLPARIPNLLINGANGIAVG
MTTNIPPHNLSEVISGLHMLMKNPDATTKDLMKVIPGPDFPTGGIIMGRGGIYRAYESGK
GNIVVRAKTNIETEKSGRERIIVSEIPYMVNKAELVKKIADLAREKIIDGITGVRDESDQ
TGMRITIDIRRDASASVVLNNLFKQTQMQANFGMNMVAIVDGAPHYLTLKQMLQYYLDHQ
KDVVTRRTKFELAKAEARAHILEGLRIALDNIDEIVHIIRSSHSSDIAKATLISRFGLDD
KQSQAILDMRLVRLTGLERDKVEAEYKELQAKIADYKDILAKPERIDKIIYDELLDIQKR
FGDKRRTEIGASEVVSIEDEDLIEKQNILLTVTHNGYIKRMPIQEFKTQNRGGKGIKGMG
VQDSDFIEHLIYSSTHDMLLFFTNAGKVYSKKAYEIPEYGRMAKGLPVVNLLQLEKGEKV
QTVINVPEGADDNYLFFITKMGTVKRTHVSEFSNIRNSGLIALTLRDGDELSNVLTTDGK
QNILIGTHLGYAVTFNENDVRAMGRTAAGVRGINLRDHDYVVGSGVLDADDQVLVISEKG
YGKRTPAAEYPVKGRGGKGIKTANITEKNGPLASVIVISKGKDIMVITTDGIMIRFKTKD
VSQTRRSTMGVRLIKVNDDSQVASLTIVPSEADQDQVDDEDDNDDNE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatcaaacccaagatcgtagaattagaaacgtcgatttaactagcatgatg
cgtagttctttcttggactatgcaatgtcagttatcgtagctcgtgctttgcctgatgtt
cgtgatggtttgaagcctgtacagcgccgtattctttacggaatgagcgaattaggtgtt
acacctgataagccatataagaagagtgccagaattgttggggaagttatgggtaagttt
cacccacacggtgactcatcaatttatttagctatggctcacatggcacaagacttttca
tatcgttacatgctagttgacggtcacggtaactttggttccgtcgacggggatgaacca
gccgcaatgcgttataccgaagcaagaatgagtaaaatcgctgtggaaatgcttcgtgat
atcaacaaaaatacaatcgactggcaaagaaactatgatgatactgaaaatgaaccagta
gttttgccagctagaattcctaacttgttgattaacggtgctaatggtatcgctgttggt
atgacaaccaacattccacctcataacttaagtgaagtaattagcggtttgcatatgttg
atgaaaaatcctgatgcgactactaaggatttgatgaaagttattccaggtcctgatttt
ccaactggtggtattatcatgggtcgcggtggaatttaccgtgcttatgaaagtggcaag
ggcaatatcgttgttcgtgctaaaaccaacattgaaactgaaaagagtggccgtgaaaga
attatcgttagcgaaattccttacatggtcaacaaggctgaattagttaaaaagattgca
gatttagctcgtgaaaagatcattgatggtattaccggtgttcgcgatgaatctgaccag
actggtatgagaattaccatcgatattcgccgggatgctagtgcgagtgttgttttgaat
aatttattcaagcaaactcaaatgcaggccaacttcggcatgaacatggttgccattgtt
gacggtgcacctcactacttaactttgaagcaaatgttgcaatactacttggatcaccaa
aaagatgttgtaacgcgtagaactaagttcgaattagccaaggctgaagctagagctcat
attcttgaaggtttaagaatcgctctagataatatcgatgaaattgttcatattatccgt
agcagtcattcaagtgatattgctaaagcaactttaattagtcgttttggtcttgatgat
aagcaatctcaagcaattttggatatgcgtcttgtacgtttaaccggtttggaacgagac
aaggttgaagccgaatataaagaattgcaagctaagattgctgactacaaggatattttg
gctaagcctgaacgaatcgataagatcatttacgatgaattattagatattcaaaaacgt
tttggtgataagcgtagaactgaaatcggtgctagtgaagttgtttcaattgaagacgaa
gatttaattgaaaagcaaaatattcttttgactgtaactcataatggctatatcaagaga
atgccaattcaagaatttaagacccaaaaccgtggtggtaaaggtatcaagggtatgggc
gttcaagatagcgacttcattgaacacctaatttactcaagtactcacgacatgcttttg
ttctttactaatgctggtaaagtttactcaaagaaagcatatgagattccagaatatggt
cgtatggccaaaggcttgcctgtagttaacttgcttcaacttgaaaagggcgaaaaggta
caaactgtaatcaacgttccagaaggagcagatgataattacttattcttcatcactaag
atgggtaccgtaaaacgcactcatgtcagtgaattttcaaacattagaaatagtggtttg
attgctcttactttgcgtgatggggatgaattaagcaatgtccttactactgacggtaag
caaaacattttaattggtactcatttaggctatgcagtaacctttaacgaaaatgatgtt
cgtgctatgggtagaactgctgcaggtgttcgcggaattaacttacgtgatcatgactat
gtagttggttcaggcgtattagacgcagacgaccaggtattagtcatttctgaaaagggt
tatggtaagcgtactccggctgcagaatatccagttaagggccgtggtggtaaaggtatc
aagactgctaatatcactgaaaagaatggtccacttgctagcgtaattgtcattagcaag
ggcaaggacatcatggttatcactaccgatggtattatgattcgctttaagactaaggat
gtttctcaaactagacgtagcaccatgggtgttcgcttaatcaaggttaacgatgatagt
caagttgcaagtttaaccattgttccatctgaagctgatcaagatcaagttgatgatgaa
gatgacaatgatgataatgagtaa
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