Leptopilina heterotoma: 122509839
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Entry
122509839 CDS
T08438
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
lht
Leptopilina heterotoma
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lht03036
]
122509839
Chromosome and associated proteins [BR:
lht03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122509839
microRNA pathway
RISC loading complex
122509839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
DEAD
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
122509839
NCBI-ProteinID:
XP_043480045
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MAIFQNDQVYTKSFTPREYQVELLYTGKVKNIIVCLGKSSEQTFIIIKLIQELSNSTRRL
FSEGGKRSIYVLRDKEKCLIKATYVRQLTDLKVIICDSGVKPDFKEQFSNVQVIVTTLET
CAQLIEEKKILPNEINLVVVDQCHKTDERSKLDFILRYFLSSNDVPRIIGLAVPLFNLTT
VPGRIGREIEKIEALFQCDIETASDIISILRYSPKPKELMIEYDEGVKCDLYETLETYAN
EALNFLKDHRYDPTEIYTDEFLEDIQKIPDPTQKPCEMIGDFLYILRTLGPWCADRAALA
LIMLSEKLKVKTPYERHYLLFNMVESLFIKMRAHCDYIFESFSEKERIYKFSTPKAHRLL
KVLKTYTPVQNKETKSEDKKNDDVKAADVKKNVANETNSNQKEAYQGRKCGNNWRPNEDG
YRKPIKSSRFMRGITDPDLLCGIIFVNNGFTAKILFYLLNEVSKHDEDLQFLSPLYTSEK
SNEDMSYSRDVAMEHKKQEEVLKRFRIHECNLLIATSILEEGIDIPKCNLVLRYNFPKNY
QSYVQCKSRARAVDALHILLVSRDETKESVWQLAQYHYIEKILLLKCSNKEPTENEEFEA
DKYTDIIPHYKPLEEDDSAKVSFNSAISLVNRYCAKLPSDTFTRLTPEWNMEMVEIHEKP
MYICSLRLPINSPVKYVVSSYPMPNRAMARRMAALQLCVELHRKNEIDDNLLPIGKENFK
AKPEDAEVPALPDESRADFSEARPGTTKRRQYYYKKTAEALTDCRPVISKPAFLYHINMV
LSCPLPEEQNTRGRKIYPPEDADIGFGILTLKKIPKLCPFPIYTRSGEVHVTLTLSKQTV
ILDENQIDRMATFLNYTFTNVLRLQKYLMLFDLNASENSYIIVPVKKISGTNDQDIVVNW
EFLDSIYQNREMLPRQMPEEERKDFKFDATKYHDAVIMPWYRNKDQPQYFYVAEICPNLS
PKSSFPGADYNTFEEYYLKKYDIQIQNLKQPLLDVDHTSARLNFLTPRYVNRKGVALPTS
SEETKKAKRENLEQKQILVPELCAIHPFPASLWRQAVCLPCILYRINALLLANQIRCQVA
QMINLGQENLKSDFKWEPLDFGWSLADVLSKSKELNKANESKIKNQLNSVSNNIIQKIEK
LPKLETKPIKKFKEIPQEEKDPFTCNENELEIGTWSNDMAILSMDFNSKEAFPLDVTALE
ENFNWNDVRYGSPTYESDDAYDSDETYSDGFGDSSDDSNDEGGRGLKIAYMGENIAEAVE
DEKQISKREINKKIIQLLESEKNSNENSWIYESDSEDNDENLEKHRNAHFEFAKVREEEI
LKNGSFISFDREISITRKNCPDVRVEENTPTKWSNYMEKIAIRFKEHLSIGKFTGNGERK
ESPKMEHLKINKSLFSFDYQPVLDGHSGPSPSLILQALTMSNANDGINLERLETIGDSFL
KYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWLPP
CYYVPKELEQALIESGVPSTLWNQADMPTLQAVNPMQINQLVRETEHKLEIMKNELDRNE
IEPASELDNLRCFIPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHV
LPTEKFSIVQDVEPVERPPGSTPYVQETNNSGKIVWKQIRYGKLEEPQNPLLKYVPNPEQ
ELEQMLDGYDFLEEKIGYKFYDRSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLIT
RHLYEDSRQHSPGALTDLRSALVNNTIFASLAVRCGFQKYFRHLSPGLSVVIDRFVRIQE
ENGHSISEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWGVYYKIM
KSEIEQFSTNVPKSPIRELLELEPETAKFGKPEKLADGRRVRVIVDVFGKGSFKGIGRNY
RIAKCTAAKCALKKLKRMQSCQKEKL
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttttcaaaatgatcaagtttacaccaagtcttttactccccgagagtatcag
gtggaacttctttacacaggcaaggtaaaaaatataattgtttgcttaggtaaaagttca
gagcaaacttttattataataaaattgattcaagaactttccaatagtactcgaagatta
ttttccgaaggtggaaaacgatcaatttatgttttaagggataaagaaaaatgtttgata
aaagcaacttacgtccgccaattaacagacttgaaagtaatcatttgtgattctggagta
aaaccagattttaaagaacaattttctaatgttcaggtaatagtaacaacgctcgaaaca
tgcgcacaattaatagaagaaaagaaaatattgccaaatgaaataaatttagttgtagtt
gatcagtgccataaaactgacgaaagaagcaaactcgattttatattgcgatacttttta
tccagcaacgatgtgccccgaatcatcgggcttgctgtgcctttatttaatctgactaca
gttcctggccgaattggtcgtgaaatagaaaaaattgaagctctttttcaatgtgacatt
gaaacagcaagcgatatcatatcaatacttcgttatagtccgaaaccaaaggagttaatg
atagaatatgacgaaggcgtcaagtgtgatttgtacgagactttagaaacatatgccaat
gaagctttaaattttttgaaggatcatcgttacgatccaacagaaatttataccgacgaa
ttcctcgaagacattcaaaaaattcccgatcccacacaaaaaccctgcgaaatgatagga
gattttttatatattcttagaacacttggaccttggtgtgcagatcgtgcggcacttgca
cttatcatgttgagtgagaaattgaaagttaaaactccttacgaaaggcattaccttctc
tttaatatggtggaatcattatttataaaaatgagagcacattgtgactatatttttgag
tcgttcagtgaaaaggaaagaatttacaaattttcaacaccaaaagcacaccggttgctg
aaagttttgaaaacttacacacccgttcaaaataaagagacaaagtctgaagataaaaaa
aacgatgatgtaaaggctgcagacgtgaagaaaaatgtagcaaatgaaacaaattcaaat
cagaaagaagcgtatcaggggagaaaatgtggaaataattggagaccaaatgaagacggt
tatagaaaaccgattaaatcgtcgagatttatgcgtggaattacagatccagatttactt
tgtggaattatttttgtcaataatggatttacagcgaagattttattttaccttttaaat
gaagttagtaaacacgatgaggatttacaatttttatcgccactttacacgagcgaaaag
tcaaacgaggatatgagttattcacgtgatgtagcaatggagcacaaaaagcaggaggag
gttttaaaacgttttcgaattcacgaatgtaatttactcatagcaacttcaattttagaa
gaaggaatcgacattccaaaatgtaatctcgtcttgagatacaattttccaaagaattat
caatcgtacgtacagtgcaaaagtagagcgagggctgtggacgccttacatattcttcta
gtgtcacgagatgaaacaaaggaatctgtgtggcaactcgctcaatatcattatattgaa
aagattttattacttaagtgctcaaataaggaaccgactgaaaatgaagaatttgaggct
gataaatacactgacatcattccacattacaaacccctggaagaggatgattcggctaaa
gtttctttcaattcagccatttctttagtaaatcgatattgtgcaaaattaccgagtgac
acttttacaagactcactccagagtggaatatggaaatggttgagattcatgagaaaccg
atgtatatttgttccttgcgtctgccaatcaattctccagtgaaatacgttgtttcttcc
tatccaatgccgaatagagcaatggctcgaaggatggctgctttgcaattgtgtgttgaa
ctgcatagaaaaaatgaaatcgacgacaatcttttaccaattggcaaggagaattttaaa
gccaagcccgaagatgctgaagttccagcattaccagacgaaagtagagctgatttttca
gaagctcgacctggaacgacaaagcgtagacaatattattacaaaaagactgctgaagct
ttgacggactgtcgaccagtgattagtaaacctgcttttttgtatcatattaatatggtt
ctaagttgccctttgcccgaggagcaaaatacgaggggacgaaaaatttatccacctgaa
gatgccgatataggatttggtattctgacccttaagaaaattcctaaactgtgtcctttt
ccaatttatacacgatcgggggaagtgcacgtaacacttacgcttagcaagcaaactgtg
atcttagatgaaaatcaaatcgatagaatggcaacatttcttaattacacatttacaaat
gtattaagactccaaaagtatttaatgctctttgatctgaatgcttcagagaattcttat
atcattgtccctgtaaaaaagatttcaggaacaaatgatcaggatattgtagttaattgg
gaatttctcgatagtatttatcaaaatcgagaaatgctccctcgacaaatgccagaggag
gaaagaaaagactttaaatttgacgcgactaaatatcatgatgcagtgataatgccttgg
tatagaaataaagaccagccacagtatttttatgtcgccgagatatgtccgaatttaagt
ccaaaatcgtcgtttcctggtgccgattataatacattcgaggaatattatttaaaaaaa
tatgatattcaaatacaaaatttgaaacaacctttgctagacgtggatcacacgtctgct
agacttaattttctaactcccaggtatgtgaatcgaaaaggcgttgctctaccaacaagt
agtgaagagacgaaaaaggcgaaacgagaaaatctggaacagaagcaaattctcgttcct
gaattgtgtgcaattcatcctttcccagcatctctctggcgacaagcagtctgtttacct
tgcattctttacagaataaatgcactactcttagctaatcaaatacgatgtcaagtagca
caaatgattaatttaggtcaagaaaatttgaagtcagatttcaaatgggaaccattggac
tttggctggagtctcgcggacgtcttgagcaaatccaaagaactgaataaagcaaatgag
tcaaaaataaaaaatcaattgaattccgtttcgaataatataatacaaaaaatcgaaaaa
cttccaaaattagaaacaaaaccaataaaaaaatttaaggaaattccccaagaagagaaa
gatcctttcacttgtaacgaaaacgaattggaaattggaacatggtccaacgatatggca
atactatcgatggactttaattcaaaggaagcttttcccctcgacgtcacggctctagag
gagaatttcaattggaacgacgttcgttacggttcgccgacttatgaatccgacgatgct
tacgattccgacgagacttatagcgacggttttggtgactcgtccgacgacagtaacgac
gagggaggtagaggattaaaaattgcctacatgggcgaaaacattgccgaggccgtcgaa
gacgaaaaacaaatatcaaagcgagaaattaataaaaaaataatccaacttctcgagagc
gagaagaattccaatgagaattcctggatttacgagagtgactccgaggacaatgatgag
aatctagaaaaacacagaaacgctcattttgaatttgcaaaagtacgagaggaggaaatt
ctcaaaaatggttcttttatttcgttcgatagagaaatttccataacgcgaaaaaattgt
cccgatgtccgcgtcgaggaaaatacaccaacaaaatggagtaactacatggaaaaaatt
gcgataagattcaaggaacatttatcaattggaaaattcaccggcaatggagaaagaaag
gaatctccgaaaatggaacatttgaaaataaataaaagtttatttagttttgattatcaa
ccggtattagatggacattcaggaccgagtccaagtctaattctccaagcgctgacaatg
tcgaatgcaaacgatggaattaatttggagagactcgagacgattggcgattcttttctg
aaatatgcaataacaacgtatttatattgtacatatgataatattcatgagggtaaattg
agtcatttgcgttcgaagcaagtgagtaatttaaatctctatcgactgggaaggcagaaa
atgttgggggagagtatgatagcgacgaaatttgagccgcatgacaattggttgccaccg
tgttactatgtgccgaaggaacttgaacaggctttaattgaatcgggtgtgccgtcaact
ttgtggaatcaggccgatatgccgacattgcaagccgtcaatccaatgcaaataaatcaa
cttgttcgcgaaacggagcataaattagaaataatgaaaaacgaattggatcgtaatgaa
attgagccagctagcgaattggataatttacgatgttttattccgtataatttaatcact
caacatagtattccggataagagtattgccgattgtgttgaggctctgattggtgcttat
ttgattgcttgtggaccgagaggcgctcttttattcatggcctggttgggaattcacgtt
ttgcccactgagaaattttctattgttcaagatgttgagcccgtggagagaccgcctggt
agtacgccgtacgttcaagaaacgaacaacagtgggaaaattgtctggaaacagattcgt
tatggtaaattggaggagccacagaatccgctattaaaatatgtgcccaatcctgaacaa
gaactggaacaaatgctcgatggatatgattttctggaggaaaaaattggctataaattc
tatgatagaagttatttgttacaagccttcacacacgcttcttatcaaccgaatagatta
acagattgctatcagcgattagaatttcttggcgatgctgttttagattatctaatcacg
agacatttgtacgaagactcgagacaacattctccaggagcgttgaccgatttaagatcc
gctcttgtgaataacacaatttttgcttccttagccgttagatgtggtttccaaaaatat
tttcgacatttatctccaggactgagtgtcgtaattgacagatttgttagaattcaagag
gaaaatggacattccattagcgaagagtattatttaattggagaagaagaatgtgaagaa
gcagaagacgtcgaagtaccaaaggctctgggagatgttttcgaatctttagcaggagca
atttatctagatagtggaatgtccctggacgctgtttggggagtttattacaaaataatg
aaatctgaaattgagcaattcagtacaaatgttcctaaatcaccgattcgagaactttta
gaattggaaccagaaacagcgaaattcggaaagccggaaaaattggcagacggcagacga
gttcgtgtgattgttgacgtattcggtaaaggttcatttaaaggaattggacgaaattat
cgaattgcaaaatgtacagcggcaaagtgcgcattaaaaaaattgaagagaatgcaaagt
tgccagaaggagaaactatga
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