Leishmania infantum: LINJ_24_1590
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Entry
LINJ_24_1590 CDS
T01112
Name
(RefSeq) putative ATP-dependent DEAD/H DNA helicase RecQ
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lif
Leishmania infantum
Pathway
lif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LINJ_24_1590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lif03032
]
LINJ_24_1590
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_24_1590
Enzymes [BR:
lif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LINJ_24_1590
DNA replication proteins [BR:
lif03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
LINJ_24_1590
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
LINJ_24_1590
Bloom's syndrome complex (BTR)
LINJ_24_1590
FA (Fanconi anemia) pathway
LINJ_24_1590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
GreA_GreB_N
Motif
Other DBs
NCBI-GeneID:
5069412
NCBI-ProteinID:
XP_001465982
UniProt:
A4I0Z1
LinkDB
All DBs
Position
24:588042..593882
Genome browser
AA seq
1946 aa
AA seq
DB search
MPTAASLSSASTSTATARAAPPYRTNESEWIPALASAVQRSLEGGAGSSSNGGSDSAGWN
PANRHQGAAQSAAMSAARDTAPPLAEYQAAYQCRSLHQSGFVAVPPPARLYPALGGSIGA
GSCGNLKIGSSSTGNNISVASYAPPAPLSTRHATPDASGSSALPPSLAHSAVPAPGASQR
TATTWTSSMPATAASFPVSSVCDPGGGELAGSSAAVGVTAAAAPSSSMFPTMPPPAVPRG
GLVKVPPAAASAPAAACMAPSPLTLRDVKAEMRRVAKQLREAQHHRDDLVLLEDEEHDAT
DELQQLDVRIAELEQRFARFRAFQATLLNRPTPASTPPSLSSMSSSLVRSPHATSVMDLG
GAIYSSAGVVGYTGGGEQRGPLMQSTVTSPWPAAPTSGPPSAAGATGAPPPHGDWPTAMT
EYSVNRGDIGGCALELPGPSVSDANGGTTSFRSAECSAPSARKGFSWEAYEQQVDPEALS
RDALSRTAHVELPVNPTHQYGGERFPWSAELRRMMREVFGLHDYRFCQLEIMNACMDGRD
VFVLLPTGGGKSLCYQLPALMPNPAQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTN
DAARRSLFQEWASGHVVHTLVYVTPEYFGRSDHFVGTLQGLADKGLLCRFVIDEAHCVSQ
WGHDFRPDYRKLSVLKRQFPRTPITALTATATDLVQQDVIKTLALRDAIIFKGSFNRANL
KYSVQHVRGKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHSE
AASKNERQERWTRDELQVICATIAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDG
LPSECVLLSTTTDRQRQERLIHGSKDWRASLTSLHRMLAYTLNNVDCRRRQQLHHFGEQV
DVHFCLTQRAAAGGGAGPPLPPTPAASVSVVTQLCDNCASKLAEGWTVKEVDVGNILLDL
YAIILRLGTMTSKQLIGVYRGSVSEMGRTVEMRMRMKGTPAEYKSGAKHSKVLLDRTLLE
GMQLGLFEERLDSINDFAVCAFVELGGTPAAQQLHRDIKAGHRVITLRLRNVKARSSKGD
ASFGAVASAVSGATAKDDMPLVELFDCAKRQAAVGDGRGTRASAAAPEEKKRKPEAKKGR
RGNRYVLDEADGSTDDDEGAISSIEEDSAMSNSMASFIDDESSSMATPSYISSVTTPQRD
GAGASEAAAGRRQRTSSTAGSQDGVLSTLSEDTRGQPQVHQPPRKRTRGDAADQRAAVAQ
RGLGGTAAAHAAAASTVPAARLERLKALLQEEMDRLVQTLVSQAVGCRSYNVMPKSTILR
LTDTLAIPGWGSVGDLIDLEGMGKNKVKRYGADILRVYRHFRYIHIGDVEELSEAEAAEV
KDVKTAVRPRNRLGRANASAGELIVENDGEEERGGDGDRLASATASGFVGGIGIEAGAIN
GRATHQQAQRPILLDPVTPEKARASVSSAAGTPSRDGGSGVALPGTLGDQPRQRRTMFTF
SSTTAAAPAAVLIGIGSRSSSPRLSLQGHEGCAAAPPLPPPTNPAAAVHRVADSYDQLTC
DPSVANAHGNTRMIAAPTAAAALPPHEPHPHQPPMPQFSVPLFPEPPAWQTPATAAAASG
VPSSSTPAPLLLPHNSTAGGNAHLFSPSSPSFTSASAPLGGTGLPMAQRLCPQVHHQPST
MMTLAVPSDAVRGGDPSLSDTLRGSGQTGAAHAAENSELLIGSSPIPTQQQQQQLRHTYF
FNCQSAPQTLSGSGGETGEGQQSSSGVVLLGADGPTQGPWTPATSMAGCRHDVPPPPPLH
AEKGMHSVEYLMGLCNDARLRTPLSGRPSGSATRGGGGPSRSTMPAPARAAAYSTGAATT
NTDHAVSHSLPCPTTGGRPLGSGSTLSSSCAEESISFSERPLFQTSTPESAPQLQLQKQE
NGAAAGGDNGAGRDRQEVFTVDDDSE
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagcggcgtcattatcatccgcatcgacttcgacggcgactgctcgagcggcc
ccgccgtaccgcacaaacgagtcggagtggatacccgctctcgcctctgccgttcagcgc
agccttgaaggcggtgctgggagcagcagcaacggcggtagtgacagcgctgggtggaac
ccggcaaacagacatcaaggagccgcccagagtgcggcgatgagtgctgcccgggacacg
gcgcctcccttggcggagtaccaggctgcttatcagtgccgtagcctccatcagagcggt
tttgtcgcggtgcctcctccggctcgcttgtatccagctcttggaggtagtattggtgca
ggcagttgcggcaacctgaaaattggcagcagcagcactggcaacaacatctccgtcgcc
tcctacgcgcctcctgcaccgttgtcgacccgtcatgcgacaccggacgccagcggatct
tccgctctgccaccgtctctggcacattctgccgtccccgcgccaggggcgtcgcagcga
acggcaactacgtggacctcaagtatgcctgcgactgccgcatcatttcccgtctcctct
gtctgcgacccaggtggtggtgagctggctgggtcgagcgccgctgtcggtgtcactgct
gctgctgctccctcgtcttcgatgtttcctaccatgccacccccagccgtgcccagaggc
gggctggtcaaagtacctcccgctgccgcttcagctcctgccgctgcgtgcatggcgccg
tcgccgttgacgttgcgcgacgtgaaagcggagatgcggcgcgtcgccaagcagctccgc
gaggcgcaacaccaccgcgatgacctcgtgctcctggaagacgaagagcacgacgcgaca
gacgagctgcagcagctagatgtgcgcattgcagagctggaacagcggtttgcacgcttc
cgcgctttccaggcaacgctgctgaaccgccccacacccgcctcgacgccgccgtccctc
tcttccatgtcgtcctcgctcgtgcgatcaccgcacgccacatcggtgatggatctcggc
ggtgcaatctacagcagcgctggcgttgtcggctacaccggcggcggcgagcagagaggc
ccgctgatgcagagcactgtgacatcgccttggcccgccgcgccaacgagtggcccccct
tcagcagcaggggctactggtgcaccaccaccacacggtgactggcccaccgccatgacc
gagtacagcgtaaaccgtggtgacatcggcggctgtgccctggagctgccaggtccgtcg
gtctccgacgccaacgggggtacgacgagcttccgcagtgccgaatgctcggccccctcc
gctcgcaaaggcttctcgtgggaggcctacgaacagcaggtagacccggaggcgctgtcg
cgcgacgccctgtctcgcaccgcgcacgtcgagctccccgtgaaccccacgcaccagtat
ggcggcgagcgcttcccgtggtcagcggagctgcggcgcatgatgcgcgaggtgttcggg
ttgcacgactaccgcttctgccagctcgagatcatgaacgcctgcatggacggccgcgat
gtttttgtgctgctgccgacgggtggcggcaagtccctctgctaccagcttcctgcgctg
atgcccaacccggcccaggtcaccgttgtcgtgtcgccgctcatctcgcttattcaggat
caggtgtacgcgctgatcgcaaacgacattcctgccatggccctcaccgggcagaccaac
gacgcggctcgccgcagtctcttccaggagtgggcctccggccacgtcgtgcacacgctc
gtgtacgtgacgccggagtactttggccgcagcgaccactttgtgggcacgctgcagggg
cttgccgacaaggggctgctctgccgcttcgtgattgacgaggcgcactgcgtgtcgcag
tggggtcacgacttccggccagattaccgcaaactctcggtgctgaagcggcagtttcca
cgcacacccatcacggcgctgaccgccacggcgacggatctcgtgcagcaggatgttatc
aagactcttgccctgcgcgacgccatcatcttcaagggctccttcaaccgagccaacctc
aagtactcggtgcagcacgtgcgaggcaagcaggtgatcccggttgttgaggacctcgta
ctgcaccgattctcgccgtcgtcgtgcggcatcgtgtactgcctgtcgcgcaaggactgc
gaggagatggcggcggcactcgtacgcaggggcattaaggcctcctactaccactccgag
gcggcgtcgaagaatgagcggcaggagcgatggacgcgtgatgagctacaagtgatttgc
gctaccatcgcgtttggaatgggcatcaacaagccagatgtccgctacgtcgtgcacgcg
gctatgcccaagtccatcgaggggtactaccaggagagcggccgcgccggccgtgacggt
ttgccgtcggagtgcgtgctactgagcaccaccacagatcgacagcggcaggagcggctg
atccacggctcgaaagactggcgcgcctccctcacctcgctgcaccgcatgctggcttac
accctcaacaacgtcgactgtcgccggcgccagcagctgcaccactttggtgagcaggtg
gacgtccatttttgccttacgcagcgggctgccgctggcggtggcgcggggccgccgctg
ccaccgacgccggccgcatcagtgtctgtcgtcacgcagttgtgtgataactgtgccagc
aagctggccgagggctggacggtgaaggaggtggacgtgggcaacattctgcttgatctg
tacgctattatcctgcgtctcggcaccatgacgtcgaagcagctgatcggcgtgtaccgc
ggctctgtctcggaaatggggcgcaccgtcgagatgcgcatgcgcatgaagggaacgccg
gcggagtacaagagtggcgccaagcactcgaaggtacttttggaccgcacgctgctcgag
gggatgcagctcgggctcttcgaggagcggctggacagcatcaatgacttcgccgtgtgc
gcctttgtagagcttggcggcaccccagcagcgcagcagctccaccgcgacatcaaggct
ggacaccgcgtcataacgctgcgcctgcgaaatgtgaaggcccgcagtagtaaaggggat
gcgagcttcggcgctgtggccagtgctgtttcgggtgccaccgccaaggacgacatgccg
ctcgtcgagctgtttgactgtgccaaacgacaggcggccgtgggcgacggtcgcggcaca
cgggcttcggcggcagcaccagaagagaagaagcgcaagcccgaggcaaagaaggggcgc
cgcggcaacaggtacgtgctggacgaggcagacggcagcactgatgacgacgaaggggcg
atctcatccatcgaggaagactctgcaatgtcgaacagcatggcgtcctttatcgacgat
gagagcagcagcatggctaccccatcctacatctccagcgtgacgacgccgcagcgcgat
ggggccggggcatcggaagcagctgctggtcgccgacagcgcacttcatcgacggccggg
tcgcaggacggcgtcctctcgacgctgtcggaggacacccgaggccagccgcaagtgcat
cagccgccgcggaagcgcactcgcggtgatgcggccgaccagcgagcggccgtggcgcag
aggggcctaggcggcactgctgctgcacatgcggctgcggcgtcgaccgtccctgcagcg
cggctggagcgcctgaaagcgcttctgcaggaggagatggatcggctcgtgcagaccctc
gtgagccaggcggtggggtgccgaagttacaacgtgatgcccaagagcacaattctgcgg
ctgaccgacacgctcgccatccctggctggggcagcgtcggcgacctcatcgacctggag
gggatgggcaagaacaaggtgaagcggtacggcgccgacatcctgcgggtgtaccggcat
ttccgctacatccacataggcgacgtcgaggagctgtcggaggcagaggcggcggaggtg
aaggatgtgaagacggcggtgcggccgcgcaatcgcctcggccgcgcaaacgcctccgct
ggcgagttgatcgttgagaatgacggggaggaggagcgcggtggtgatggcgaccgacta
gcgagtgcgaccgcgtctggttttgtgggcgggatcggcatcgaagcgggagcgataaac
ggccgtgcaacgcatcagcaggcacagcgcccgatactgctggacccagtcacgcccgag
aaggcgcgcgcatcggtgtcctcggccgcaggcaccccatcacgcgatggcggcagcggc
gtggcactgccaggcaccctcggcgaccagccgcggcagcgacgcacgatgttcaccttt
tcatccaccacagctgccgctccagcggcggtgctcatcggcatcggctccagatcatcc
tctccgcggctgtctcttcagggccacgaggggtgcgcagctgcaccaccgctaccaccg
ccaacaaatccagctgccgcagtgcaccgtgtcgcggacagctacgaccagctcacgtgc
gatccatcggtggccaatgcacatggaaacacacgtatgattgctgcccccacagcagca
gccgctctgccgccgcacgagccgcatcctcatcagcctcccatgccgcagttctctgtg
cctctatttccggagccgcctgcgtggcagacgcctgccactgccgccgctgcttctggt
gtgccatcatcgagcacgccggcgccgctgctgttgccccacaacagcaccgccggcgga
aacgcccatctgttctctcccagctcaccctcctttacatccgcctcggcgcctctgggc
ggcacaggacttcccatggctcagcgactgtgtccacaagtgcaccaccagccgtccacg
atgatgacgctggcggtgccttctgatgccgtgaggggtggtgaccctagcctgtcagac
acactccggggaagtggtcagaccggcgctgcccacgccgccgagaacagcgagctactg
atcgggagtagccctattcccacgcagcagcagcagcagcagctacgccacacatacttc
ttcaactgtcagagcgctccgcaaacgctcagtggaagcggcggagagactggcgagggg
cagcagagtagtagcggcgtggtgctgctcggcgccgacggacctactcaagggccctgg
acgccggccacgtctatggcgggctgcagacacgacgtgccgccgccaccaccgctgcat
gcggaaaagggcatgcacagcgtcgagtacttgatgggcctctgcaatgacgcccggctc
cgcacgccgctgagcgggcggccgtctggctcggcgactcgtggcggtggggggccctcc
cgatccacgatgccagcgccagcacgcgccgcggcttattccaccggcgcggccacgacg
aacaccgaccatgctgtgagccattcacttccctgccccacgacgggcggaaggccgctc
ggcagtgggtcgacgttgtcctcgtcctgcgccgaggagtccatctccttctcagagcgg
ccactatttcagaccagcacgccagaatccgccccacagctgcagctgcagaagcaagag
aatggtgcggcagcaggtggcgataatggcgctggccgcgacaggcaagaggtcttcacc
gtcgacgatgactcagaataa
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