Leishmania infantum: LINJ_35_0370
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Entry
LINJ_35_0370 CDS
T01112
Name
(RefSeq) putative ATP-dependent DEAD-box RNA helicase
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lif
Leishmania infantum
Pathway
lif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LINJ_35_0370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_35_0370
03036 Chromosome and associated proteins [BR:
lif03036
]
LINJ_35_0370
Enzymes [BR:
lif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LINJ_35_0370
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
LINJ_35_0370
mRNA degradation factors
5'-3' decay
Decapping complex
LINJ_35_0370
Chromosome and associated proteins [BR:
lif03036
]
Eukaryotic type
Gene silencing
piRNA pathway
LINJ_35_0370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
5072938
NCBI-ProteinID:
XP_001468856
UniProt:
A4IAT7
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All DBs
Position
35:93836..95053
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AA seq
405 aa
AA seq
DB search
MSDSNWKAQLNAPQKSTRKKTEDVESRRNVNFEEYALRRELQMGIFEKGFEKPSPVQEEA
IPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTRESYVQALLMVPTRELALQTAQVTKE
LGKHIPGLEVMVTTGGTTLRDDILRLTSKVHILVATPGRVLDLASKKAVDLSHCHILVLD
EADKLLSQEFMEIIDDLYTYLPSQLQSMLFSATFPVTVKTFAERHLHNPYEINLMDELTL
KGVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHA
RMQQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYSETYLHRIGRSG
RFGHLGVAINFVTYDDRYNVYRIEQELDTEIKPIPAEIDPELYAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcgaactggaaggctcagctgaacgcgccgcagaagagcacgcggaaaaag
acggaggatgtggagtctcgccgtaacgtcaacttcgaggagtacgccctgcgccgcgag
ctgcagatgggcatcttcgagaagggcttcgagaagccaagccctgtgcaggaggaagcc
attcctgtcgcgcttcagggcaaggacgtgcttgcccgtgccaagaacggtactggcaag
acagcctcattcgtgatcccagtgctcgagaaggtcgacacccgcgagtcgtatgtccag
gctctcctgatggtgcccacccgtgagctggccctgcagacagcgcaggtgacaaaggag
ctgggcaagcacatccccggcctggaggtgatggtgaccaccggtggtacgacgctgcgc
gatgatattcttcgcctgacaagcaaggtgcacattctggtggcgactcccggccgtgtg
cttgacctggcgagcaagaaggcagttgacctttctcactgccacatcctggtgctggac
gaggccgacaagctgctctcccaggagttcatggagatcatcgacgacctgtacacttac
ctcccttctcagctgcagtccatgctcttctctgccacgttcccggtgacggtgaagacg
ttcgcggagcgccacctgcacaacccctacgagatcaacctgatggacgagctgaccttg
aagggtgtaacgcagtactatgctttcgtcgaggagcgccagaagatccactgcctcaac
acgctcttcaacaagctgcaaatcaaccagtctatcatcttctgtaatagcgtcaaccgc
gtggagctactcgcgaagaagattactcagctcggctatagctgctactacatccacgct
cgcatgcagcagcagcaccgtaatcgcgtcttccacgacttccgcgagggccactgccgt
aacctcgtctgctccgatctcatcacccgtggtatcgatattcaggccgtgaacgtcgtc
atcaacttcgacttccccaagtactccgaaacgtacctgcaccgcatcggccgctccggt
cgcttcggtcatctcggtgtcgccatcaactttgtgacgtacgatgaccgctataatgtc
taccgcatcgagcaggagctggacacagagatcaagccgatcccggctgagatcgacccc
gagttgtacgcagcataa
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