Leishmania infantum: LINJ_36_1930
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Entry
LINJ_36_1930 CDS
T01112
Name
(RefSeq) putative DEAD box RNA helicase
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
lif
Leishmania infantum
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lif03009
]
LINJ_36_1930
Enzymes [BR:
lif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LINJ_36_1930
Ribosome biogenesis [BR:
lif03009
]
Eukaryotic type
90S particles
Helicases
LINJ_36_1930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
5073879
NCBI-ProteinID:
XP_001469775
UniProt:
A4IDF6
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All DBs
Position
36:complement(728310..729893)
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AA seq
527 aa
AA seq
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MSSAPRKLTTAMREDDDGGNRGNRTSMQAWSTSSVKHQSLGSELLDDEEFKTKTFQDLGL
CQELCTACADAGWQHPTRIQASAITVFAEGRDLIGVAQTGSGKTGAYALPLVNWLLAQRK
TPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACELSKRPHVVVGT
PGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMDYEKEIDAILEQLPQNRRTMLFSATLS
TKIDRLQKASLRDPVLLQVHRKNTTVDTLKQYYIFAPFAQMLSYLHLFLTKETGNHILIF
CRSAALVHKITLTLRILGHRALPLMGRMDQSNRNIALTKFKEGKVRMLICTDVAQRGLDI
PHTDVVVNFSLPDHVEDYIHRVGRTARAGAEGKAVNLISQYDIVLLQKIEQQTGVKCVEY
PFLPESEVQLVLQRVEDAEQEAIREIREDAEERSLEKESRQLTTARKGKRDRGDADMGYD
DAKHGTSDFATLRMRREHESIFEMTKKEQHKSLWAKRREAKQQAKSR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagcgccgcgcaagctcaccacagctatgcgcgaggatgacgacgggggcaat
cgtgggaacagaacctccatgcaagcctggagcacctctagcgtcaagcaccaaagcctc
ggctctgagctcttggatgacgaggagttcaagacgaagacattccaggacctcggcctg
tgccaggagctttgcacggcgtgcgccgatgctggctggcagcacccgactcgcattcag
gcctccgctatcaccgtctttgccgagggccgcgacctcattggtgtggcgcagactggt
agcggcaaaaccggcgcctatgcgctgcccctggtgaactggctgctggcccagcgcaag
acgccgtacctctctgtcctcgtcatggtgcccacgcgcgagctggcgcagcaggtgacg
gcccagtttgtactgctaggccgcagcgtcggactgcgtgtggcgacgctggtgggtggc
gcggacatggtcgagcaggcctgtgagctgagcaagaggccgcatgtcgtcgtcggaacc
cctggccgtgtaaaagaccacctcagcaacacgaagggcttcaagctcgtcaagctgcac
gccttggtgctggatgaggcggacaagatgctcgatatggactacgagaaagagattgac
gccattctggagcagctgccgcagaaccgccgcaccatgcttttttctgctacgctgagc
accaagattgaccgtctgcagaaggcatcgctgcgggacccggtgctgctgcaggtgcac
cgcaagaacaccaccgtggacacactcaagcagtactacatctttgccccgtttgcgcag
atgctctcctacctgcacctcttcctaacgaaggagacgggcaaccacatcctcattttc
tgtcgaagcgcggctttggtgcacaagatcacgctgacgctccgcatcttgggccaccgc
gcgttgcctctgatgggtcgcatggaccaaagcaaccgcaacatcgcgctcaccaagttc
aaggaaggaaaggtgaggatgctcatttgcaccgatgtcgcgcagcgtggtctggacata
ccgcacacggacgtcgtcgtgaatttctcgctgcctgaccacgtcgaggactatatccac
cgcgtgggccgcacagctcgcgctggggctgagggcaaggccgtgaatctcattagtcag
tacgacattgtactgctgcaaaagatcgagcagcaaacaggcgtcaagtgcgtcgagtac
cccttccttccggagagcgaggtgcagctggtgctccagcgtgttgaggatgcagagcag
gaggccatccgcgaaatccgcgaggatgccgaggagaggagcttggagaaggagtcgcgg
cagctgacgacggcgcggaaaggcaagcgagaccgcggcgacgccgacatgggctacgac
gatgccaaacacggtacgagcgacttcgcaacgctgcgcatgcgccgcgaacacgagtct
atcttcgagatgaccaaaaaggaacagcacaagtctctgtgggcgaagcggcgggaggca
aagcagcaagcgaaatcgcgatag
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