Limnohabitans sp. 103DPR2: L103DPR2_02011
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Entry
L103DPR2_02011 CDS
T04120
Symbol
thrS
Name
(GenBank) Threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L103DPR2_02011 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lim01007
]
L103DPR2_02011 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lim03016
]
L103DPR2_02011 (thrS)
Enzymes [BR:
lim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
L103DPR2_02011 (thrS)
Amino acid related enzymes [BR:
lim01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
L103DPR2_02011 (thrS)
Transfer RNA biogenesis [BR:
lim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
L103DPR2_02011 (thrS)
Prokaryotic type
L103DPR2_02011 (thrS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
PADRE
Motif
Other DBs
NCBI-ProteinID:
ALK92405
UniProt:
A0A0P0MH86
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All DBs
Position
complement(2078910..2080829)
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AA seq
639 aa
AA seq
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MVQITLPDGSLREFPGPVTVAEVAASIGAGLAKAALAGKVDGKVVDTSFTIAANAQLAII
TGKDADGLEVVRHSTAHLLAYAVKDLYPDAQVTIGPVIENGFYYDFSYSRPFDLDDLAAI
EKRMSDLANKDEPVVRRVLPRDEAVAYFKGMGEHYKAEIIGSIPSNEDVSLYKEGAFEDL
CRGPHVPSTGKLKHFKLMKVAGAYWRGDSKNEMLQRIYGTAWTSKEDLQNYLTQLEEAEK
RDHRKLGRELDLFHIDEHAPGLVFWHPKGWSVWQKVEQYMRAVYQDNGYQEVKGPQIIDK
SLWEKTGHWDKYRDNMFTTESEKRDYALKPMNCPGHILIFKQGMKSYRDLPLRYGEFGQC
HRNEPTGGLHGIMRVRGFTQDDGHIFCTEDQILAESVNFTTLLQKVYKDFGFTDIIYKVA
TRPAQRIGSDEIWDKAEHALMESLRASNCDFEIAPGDGAFYGPKIEYTLKDAIGRQWQCG
TIQVDFSMAERLDAEYVGEDGNRHRPVMLHRAIVGSMERFIGILIEQHAGALPVWLAPIQ
VVVCNITDSQADYCREIAQKMQKLAGNQGLRVDLDLRNEKITYKIREHSLQKPPYILVAG
DKEKAAGTVAVRARGNKDLGVMSVDAFIELVQSDIESKV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcacacttccagacggttcattgcgtgagtttcccggtcccgtcaccgtg
gcagaggttgcagcctccattggcgctggcttggccaaagcggctttggcaggcaaagtt
gatggcaaagtggtggacacgagtttcaccatagcggccaatgcgcaactggccatcatc
acgggcaaagatgcagatggcttggaagtggttcgacattcaacggcgcacttgttggct
tatgccgtgaaggatttgtatcctgatgcgcaagtcaccattggccccgtgattgaaaac
ggtttttactacgacttttcctacagccgtccgttcgacttggacgacttggccgccatt
gaaaagcgcatgtccgatttggccaacaaagacgagcctgtggttcgtcgtgtgctacct
cgtgatgaggctgttgcgtatttcaaaggcatgggtgagcactacaaggccgaaatcatt
ggcagcattccctccaatgaagatgtgagcttgtacaaagagggcgcgttcgaagacttg
tgtcgcggcccccacgtccccagcactggcaagctcaagcatttcaagctaatgaaggtg
gcaggtgcgtactggcgtggcgacagcaaaaacgaaatgctgcaacgcatttacggcacg
gcatggaccagcaaagaagatttgcaaaactaccttacccaattggaagaggcagaaaaa
cgtgatcaccgtaaattaggtcgcgagctcgatttattccatattgatgagcatgcaccc
ggcttggttttttggcatcctaaaggttggtctgtttggcagaaggttgagcagtacatg
cgtgcggtctaccaagacaacggttaccaggaagtcaaaggtccgcaaatcattgacaag
tccttgtgggaaaaaacgggccactgggacaagtaccgcgacaacatgttcaccacagag
tctgaaaagcgtgactacgctttgaagcctatgaactgtcctggccacatcttgattttc
aagcaaggcatgaagagctaccgcgatttgcctttgcgctacggcgaatttggtcaatgc
caccgcaatgaacctactggcggcttgcacggcatcatgcgcgtgcgcggctttacacaa
gacgatggccacattttctgtaccgaagatcaaatcttggctgaaagcgttaacttcaca
acgctcttgcaaaaggtctacaaagatttcggctttaccgacatcatttacaaagttgcg
acgcgtcctgcacagcgcattggctccgatgaaatttgggacaaagccgagcatgccctg
atggagagtttgcgtgcctccaactgtgactttgaaattgcccctggcgatggcgccttc
tatggccccaaaatcgaatacaccctgaaagacgctattggccgtcaatggcagtgcggc
accattcaggttgacttctctatggctgaacgactcgatgccgagtacgttggagaggac
ggcaaccgccatcgtcccgtcatgttgcaccgcgccatcgtgggcagcatggagcgattc
atcggtattttgatcgagcagcacgctggtgccttgcctgtttggctggccccaatccag
gtggtggtgtgcaacattaccgattcccaggccgattactgtcgtgaaattgcccaaaaa
atgcaaaaactggcgggaaatcaaggccttagggtcgatttagacctccggaacgagaaa
atcacgtataaaatacgcgagcattcattgcagaagccgccttacatccttgtcgctggc
gacaaagaaaaggctgcgggtactgtcgcagtacgcgcccgaggtaacaaagacctcggt
gtcatgtctgttgatgcgttcattgaactcgtccaatcagacattgaatctaaagtttga
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