Limnohabitans sp. 103DPR2: L103DPR2_02360
Help
Entry
L103DPR2_02360 CDS
T04120
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00521
Streptomycin biosynthesis
lim00523
Polyketide sugar unit biosynthesis
lim00541
O-Antigen nucleotide sugar biosynthesis
lim01100
Metabolic pathways
lim01110
Biosynthesis of secondary metabolites
lim01250
Biosynthesis of nucleotide sugars
Module
lim_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
L103DPR2_02360 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L103DPR2_02360 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L103DPR2_02360 (rmlC)
Enzymes [BR:
lim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
L103DPR2_02360 (rmlC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ALK92742
UniProt:
A0A0P0MHN8
LinkDB
All DBs
Position
complement(2442937..2443494)
Genome browser
AA seq
185 aa
AA seq
DB search
MPYTVTPTNLPEVLILQPQVFGDARGFFFESFNARDFAKVTGLEVQFVQDNHSRSAQGVL
RGLHYQIEHAQGKLVRVTHGEVFDVAVDMRKSSENFGKWTGCHLSAANAKQMWVPPGFAH
GFLVLSESAEFLYKTTDYWYPEHERSLLWSDPALGIEWPLPEGLQTPLLAAKDVAAVPLS
QAQSY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgccctataccgtcacgcccaccaatttgccggaagttttgattttgcagcctcaagta
tttggggatgcacgtggctttttctttgaaagtttcaatgcgcgcgatttcgccaaagtg
actggcctagaagttcaatttgtacaagacaatcacagccgatcggcgcaaggtgttttg
cgaggcttgcattaccaaattgaacatgcgcaaggcaaactggttcgtgttacccatgga
gaagtttttgatgtcgctgttgacatgcgcaagtcatccgaaaattttggaaaatggacc
ggctgtcatttaagtgccgcaaatgcaaagcaaatgtgggtgcctcccggatttgcgcat
ggcttcctagtactgagtgagtcagccgagtttttgtacaaaactacggattactggtac
ccagagcacgagcgtagccttttgtggagtgaccccgcgctcggcattgaatggcctttg
ccagaggggcttcaaacgcctttgctggctgcaaaagatgtggcagctgtgccgctatca
caagcacaatcctattaa
DBGET
integrated database retrieval system
