Limnohabitans sp. 103DPR2: L103DPR2_02442
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Entry
L103DPR2_02442 CDS
T04120
Symbol
rluC
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lim03009
]
L103DPR2_02442 (rluC)
Enzymes [BR:
lim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
L103DPR2_02442 (rluC)
Ribosome biogenesis [BR:
lim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L103DPR2_02442 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALK92824
UniProt:
A0A0N7JA52
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All DBs
Position
complement(2520764..2521783)
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AA seq
339 aa
AA seq
DB search
MNHIIGPQASQSTTSPSTNPALEVKWLTVDEESAGQRLDNFLIRHLKGVPKTHIYRIIRS
GEVRINKGRASADTRIESGDVVRLPPVRISDKVAEKAARPAPGREFPLLLEDDALMAIDK
PAGVAVHGGSGVSFGVIEQLRQARPQAKLLELVHRLDRETSGILLVAKKRSALKHVQDQF
RERETGKTYLALVQGSWPEKLKVIDSSLHKYLLPDGERRVRVTSNDDPDGMRSITLVKVA
QRLEGCTLLEVTIKTGRTHQIRVHLASQGHPIAGDDKYGDFEWNKNLNKQGLKRMFLHAW
RLEFTHPATGKRVSLKSPLPPELQLYANHVKSKSTPTAI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcacattatagggccccaagcctcccaatcgaccacttccccgagcacaaatccg
gctttggaagtgaaatggttgaccgtcgatgaagagtcggcgggccagcggctggacaac
tttctcattcgtcacctcaaaggggttcccaaaacccacatttaccggatcattcgcagc
ggcgaagtgaggattaacaagggccgcgcctcggccgacacccgaattgagagcggtgat
gtggtcagacttccccctgtccggatttccgacaaagtggcagaaaaggcggccagaccg
gcgccgggacgtgaatttccactgttgttagaagacgacgctttgatggccatcgataag
cccgctggcgtggcggtacatggcggatcgggggttagttttggtgtgattgagcaattg
aggcaggcccggccgcaggccaagttgctggagttggttcaccgcctagaccgtgaaacc
agtggaattttgttggttgccaagaagcgaagcgccttgaaacacgttcaagatcagttt
cgggaacgggaaactggcaagacctatttagctcttgttcagggaagttggccggaaaag
ctgaaagttatcgacagttcgctgcacaagtacttgcttcctgatggcgagcggcgtgtt
cgcgtgacctcgaatgacgatcctgatggcatgcgctccatcaccttggtcaaggtggcg
cagcgcttggaaggctgtaccttgctagaagtcaccatcaaaactggacgaactcaccag
attcgagtgcatctggcctcgcaaggtcatcccattgcgggcgatgacaagtacggcgac
tttgagtggaacaagaatttaaacaagcaaggtttgaaacgcatgttccttcatgcctgg
cgtttggaatttacgcaccctgccacgggcaagcgggtgtccttgaaatcgccgctgcct
cccgaattacaactctatgcaaatcatgtcaaatcaaaatcaacgcccacggcaatttga
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