Limnohabitans sp. INBF002: LINBF2_23010
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Entry
LINBF2_23010 CDS
T09962
Symbol
accA_2
Name
(GenBank) biotin carboxylase subunit of acetyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00280
Valine, leucine and isoleucine degradation
limi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LINBF2_23010 (accA_2)
Enzymes [BR:
limi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
LINBF2_23010 (accA_2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
LAL_C2
GARS_A
GCV_H
RnfC_N
PTS_EIIA_1
NQRA
DUF2118
ATPgrasp_ST
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
BDU54066
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Position
complement(2309495..2311540)
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AA seq
681 aa
AA seq
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MFKKILIANRGEIACRVAATARRMGIKTVAVYSDADAQAKHVQVCDEAVHIGGSAPKDSY
LRWERILQAAKDTGAQAVHPGYGFLSENEDFAKACAAAGLVFIGPPASAILAMGLKAESK
QLMEKAGVPLVPGYHAADQDPALLQREADRIGYPALIKASAGGGGKGMRVVNSSAEFADA
LASCKREAINSFGDDAVLIEKYVQRPRHIEIQVFGDTHGNCVYLFERDCSVQRRHQKVLE
EAPAPGMTEALRKQMGEAAVAAAKAVNYVGAGTVEFIVEQTAYDKPESMKFFFMEMNTRL
QVEHPVTEAITGLDLVEWQLRVASGEPLPLQQSDLRIHGHAIEARICAENPDNNFLPATG
TLAVYRKPTCSSFEIPNTSDTGIAVRIDDGVREGDSISPFYDSMVAKLIVHGDTREQALA
RLDEALSQTRIVGLTTNVQFLRHIIRTDSFATAKLDTALIQREEKALFAQEPLGLALTAA
SVVANTLHREQALKGNDPFSSRDGWRAFGVATRNFGFVFHGASYDAVLTYVHDGSLQLSV
ADADGDVSDTLTYREDGDALHISFAGQHARVQVFHEAQGHEDVAHVFAPQGATRITVVDA
LAHAGEVQEAGGRLTAPMPGKVVSFAVAAGDKVKAGQPLAVMEAMKMEHTIAAPADGEVL
ELLYAPGDQVAEGEELLKLKV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaaattctgattgccaaccgtggcgaaatcgcttgccgagttgcggccacc
gctcgccgcatgggtatcaaaaccgtggccgtgtattcggatgctgacgcacaagccaag
cacgtgcaggtctgcgacgaggccgttcacatcggtggcagcgcccccaaagacagctac
ttgcgctgggagcgcatcttgcaagccgccaaagacacaggcgcgcaagcggtgcatcca
ggctacggctttttgagtgagaacgaagactttgccaaagcgtgcgcagcagcaggcctc
gtgttcattggtccacccgcctcagcgattttggcgatgggcttgaaagctgaatctaaa
cagctcatggaaaaagcaggcgtgcctttggtgcccggctaccacgccgctgaccaagac
cctgcgttgctgcaacgcgaggccgaccgcattggctaccccgcgctcatcaaagccagc
gcaggcggtggtggaaaaggcatgcgcgtggtcaacagcagcgccgagtttgccgatgca
ttggccagctgcaaacgcgaagccatcaacagctttggcgacgacgcggtgttgattgaa
aaatacgtgcaacgcccacgccacattgaaattcaagtgtttggcgacacgcacggcaac
tgtgtgtatttgtttgagcgcgattgctcggtgcaacgtcgccaccaaaaagtgttggaa
gaagcccctgcacccggcatgaccgaagccttgcgcaagcaaatgggcgaagccgctgtg
gccgccgccaaagcggtgaactatgtgggcgcgggtacggtggagttcatcgtcgagcaa
acggcgtatgacaagcccgagtccatgaagtttttcttcatggaaatgaacacacgtttg
caggtggaacaccccgtgactgaagccatcaccggcctcgacttggtggagtggcaactg
cgcgtggccagcggcgagccgctgcctttgcagcaaagcgatttgcgcatccacggccat
gccattgaagcgcgcatttgtgccgagaacccagacaacaatttcttgcctgccaccggc
actttggcggtgtaccgcaagcccacctgcagcagctttgaaatcccgaacacgagcgac
acaggcattgcggtccgcatcgacgacggcgtgcgcgaaggcgacagcatcagcccgttt
tacgactcgatggtggccaagctcatcgtgcacggcgacacgcgtgagcaagcactggcg
cgtttggacgaagcgctgtcgcaaacccgcatcgtcggtttgaccaccaacgtgcagttc
ttgcgccacatcattcgcaccgattcgttcgccacggccaagctcgacacggccttgatt
cagcgcgaagaaaaagccttgtttgcgcaagagcccttaggcctcgcgctcactgcggca
tcggtggtggccaacacgctgcaccgtgaacaggccttgaagggcaacgatcctttcagc
agtcgcgatggctggcgcgcttttggtgtcgccacgcgcaactttggttttgtgttccat
ggcgcgtcttacgacgccgtgctgacctacgtccatgacggcagcttgcaattgagcgtg
gccgatgcagacggtgatgtgtctgacaccttgacttaccgcgaagacggcgatgccttg
cacatcagctttgcgggtcaacacgcccgcgtgcaagtcttccacgaagcacaaggccat
gaagacgtggctcatgtgtttgcgccacaaggcgccacgcgcatcaccgtggtcgatgcc
ttggcccacgccggcgaagtgcaagaggcgggtggtcgtttgactgcgcccatgcctggt
aaggtggtgtcgtttgcggttgccgcaggtgacaaggtcaaggccggtcagccgttggcg
gtgatggaagcgatgaaaatggagcacaccattgccgcacctgcggatggtgaagtgtta
gaactgctctatgcgccgggcgaccaagtggccgaaggcgaagagcttttgaaattgaaa
gtgtga
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