Limnobacter sp. SAORIC-580: HKT17_02165
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Entry
HKT17_02165 CDS
T06583
Name
(GenBank) ATP-dependent DNA ligase
Organism
limn
Limnobacter sp. SAORIC-580
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QJR28595
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Position
463007..464755
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AA seq
582 aa
AA seq
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MKQFAELFAELDGSTSTLHKVQALRHYFEHAPAEDAAWAVYFLSGGKPKRTVPTRTLREV
ALQVSGLPDWLFEESYQAVGDLAETIAHVLPTSSTLPGQSQGLAWWMQHRILPLRNLPDE
DRIAAVQTCWNELTATERFLFVKLVGGGFRVGVSKLLVTRALAELAGLDAKLVATRMMGF
ADASNQPTAEQFSALLAVPANSSTGQDPGRLGQPLPFFLAHPLQEEPEELGPLEDWLVEW
KYDGIRAQVVKEGGQVWVWSRGEELVSEQFPELQDAFAHWPDGCILDGEILVWQGDAPAG
FNALQGRLNRKVVSKKLMADAPVVFLAYDLLRLHGDNIVNLLQRERRTALEKFYASHHEQ
STVNAMPRLLLSQSVKAHNWDALKLLREESRGRGVEGFMLKHLESKYGVGRTKADGLWWK
WKIDPMTVDCVLVYAQRGHGRRASLYTDYTFAVWETPPASEAQAQEVAQAIANGEKVEDT
VARGLPRLVPFAKAYSGLTDEEFKEVDRVIRKHTVDKFGPVRTVVPVLVFELGFEAISRS
TRHKSGVAVRFPRMLRIRHDKPLHEADHLAVLEALLPPENAV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtttgcagaattgttcgctgaactggatggctctacctcaactttgcacaag
gtgcaggctttgcggcattactttgaacatgcgcccgctgaggacgccgcttgggctgtg
tacttcttgtctggcggcaagcccaagcgcactgtacccacacgcacactgcgggaggtt
gccttgcaggtaagtggcctgcccgattggttgtttgaggaaagttaccaggcggtgggc
gatttggcagaaacaatcgcgcatgtattgccgacctcatccacattgcccggccagtcg
caaggcttggcctggtggatgcaacaccgaattctgcccctgcgcaatctgcccgacgaa
gatcgtattgcggctgtacaaacctgctggaatgaactgactgccacggagcgattcctg
tttgtgaaactggtgggcggcggatttcgagtgggggtgtccaagctgttggtgacccgt
gccttggctgaactggctgggctggatgccaagctggtggccactcgcatgatggggttt
gccgatgcaagcaatcaacccaccgcggagcagttcagcgcattgttggctgtacccgca
aacagcagcacagggcaagaccccggccgtttgggtcagcccttgccgttttttctggcg
catcccttgcaggaagagccggaggagttgggcccacttgaagattggctggtggaatgg
aagtacgacggcattcgagcccaggtggtgaaagagggtgggcaggtgtgggtgtggtcg
cgcggtgaagagttggtcagtgaacagtttccggagttgcaagatgcgtttgcgcactgg
cccgacggctgtattctggatggcgaaattttggtgtggcaaggcgatgcgccagccggg
ttcaatgctttgcaagggcgtttgaatcgcaaagtggtcagcaaaaaattgatggccgat
gcgccggttgtttttttggcttatgacctgcttcggcttcatggcgacaatattgtgaat
cttcttcagcgtgaacgtcgaactgcgctggagaaattttatgcttcacaccatgaacaa
agtactgtgaatgccatgccgcgtttgttgttgtcgcaaagtgtgaaagcacacaactgg
gatgcattgaagctgttgcgcgaagaaagccgtgggcgaggtgtggaaggtttcatgttg
aagcacctggagtccaaatacggagttgggcgcaccaaggccgatggcttgtggtggaaa
tggaaaattgatccaatgaccgtggactgcgtgttggtgtatgcccagcggggccatggc
cgccgcgcaagcttgtacacggactacacctttgccgtgtgggaaacaccgcccgcctcg
gaggcgcaagcgcaagaggtggcacaggcgattgcgaacggtgagaaagtggaagacacc
gtggcccgtggtttgccccgtttggtgccgtttgccaaggcttactctggcctgaccgat
gaagaattcaaggaagtggatcgagttattcgcaaacacactgtggacaagtttgggccg
gttcgcactgtggtgccagtgctggttttcgaacttggtttcgaagcaatttcccgctcc
actcgccacaaaagtggagtggccgttcgttttccacgtatgctgcgcattcgccacgat
aaacctttgcatgaagccgatcaccttgccgtgctcgaagctttgttgcccccggagaat
gcagtttga
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